Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0490 ATGTTAATGTTCARCACAAAACCCACCGATATGAGCAAGCCTTCAACTGAAACACCCAACACCCACTGCGATTTACTCACCAAGTTCAAGCGTTTCAAGCCTCTAGAACCTTCTCTTGGCATAGCTAGCTTCTTCTTGCTCACCCTCCTCGTCTTCCTCTCCTGCTTCTTCTACCTCGATTACAGAGGCTTACGCTCTTGGGGAACTACGCTTCTCGGTCTCCACCTCCCTTCTTCTTCTTCCTCTTCTTCCGCTGCTCCTCCACTGGTTCAGTTTCTCTCCAAAGAGGGCGATCAATGCAATGTTTATGATGGTAACTGGGTCTGGGATGAGTCCTACCCTCTCTACCACTCTGCCAATTGCTCCTTCCTTGATCAAGGTTTTCGATGCTTTGAGAATGGAAGACCTGATTCCTTCTACACCAAATGGCGATGGCACCCCAAAGCTTGCAACTTGCCCAGATTTGATGCAACGAAGATGTTGGAAAAACTACGCGATAAGCGGCTAGTTTTCGTTGGAGATTCAATTGGAAGGAACCAATGGGAATCGCTTCTTTGCATGCTTTCTTCTGCCGTGGCAAACAAGAGTAAAATCTATGAAGTTAATGGGAGCCCAATCACAAAGCATACAGGCTTCTTGTCATTCATGTTTGAAGATTACAACTGCACGGTTGAGTACTACAGATCGACGTATCTGGTCGTGCAGGGACATCCTCCTCCAGGAGCACCTGAAGGGGTGAGATTGACTTTGAGACTGGATCATATGGACTGGACTGCTCATCGGTGGAGAGATGCAGATGTGCTGATTTTCAATACCGGACATTGGTGGAACTATGAGAAGACTATTAAAATGGGTTGTTACTTCCAAATAGGAGAGGAAGTGGACATGAATTTGACCATAACAGATGCGTTCAGAATATCGGTGGAGACGATGATTGATTGGATTGCCAGAGAAGTAAACATGAACAAATCTTATGTCCTCTTCCGAACTTATTCTCCCGTGCATTTCAGGGGTGGTGATTGGAACACCGGTGGTGGTTGTAACTCGGAAACACTGCCTGATTTAGGCGCATTGCCAGCAGTATCTGACAGTCATTCAAGAACTATTGTTGATGTCTTGTCAGAGCACGCCGGCGAACCGGTAGTTATGAATTTGGACCTGCTGAACATCACGCAGATGTCGGCAAGCAGAAAAGACGGCCATGCATCTGTTTACCATATCGGGCCAGACCGAAGGGCCCCTATGCAGCTGCAAGATTGTAGCCATTGGTGTTTGCCCGGTGTTCCTGATTCTTGGAATGAGATTCTCTATGCACTTCTTCTCAAGAGGAATGCACCAAAATTTTCCCAAGTTTCACTATAA 1362 0.4648 MLMFXTKPTDMSKPSTETPNTHCDLLTKFKRFKPLEPSLGIASFFLLTLLVFLSCFFYLDYRGLRSWGTTLLGLHLPSSSSSSSAAPPLVQFLSKEGDQCNVYDGNWVWDESYPLYHSANCSFLDQGFRCFENGRPDSFYTKWRWHPKACNLPRFDATKMLEKLRDKRLVFVGDSIGRNQWESLLCMLSSAVANKSKIYEVNGSPITKHTGFLSFMFEDYNCTVEYYRSTYLVVQGHPPPGAPEGVRLTLRLDHMDWTAHRWRDADVLIFNTGHWWNYEKTIKMGCYFQIGEEVDMNLTITDAFRISVETMIDWIAREVNMNKSYVLFRTYSPVHFRGGDWNTGGGCNSETLPDLGALPAVSDSHSRTIVDVLSEHAGEPVVMNLDLLNITQMSASRKDGHASVYHIGPDRRAPMQLQDCSHWCLPGVPDSWNEILYALLLKRNAPKFSQVSL* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0490 453 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 152 438 IPR026057 GO:0016740
Amo06g0490 453 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 28 445 - -
Amo06g0490 453 Pfam PMR5 N terminal Domain 99 151 IPR025846 -
Amo06g0490 453 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 28 445 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0490 Amo-Chr6 6844214 6847583 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g0490 - - gmx:100801125 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0011 16 317782 321203 Amo06g0490 06 6844214 6847583 hybridization