Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo15g0134 ATGAACAAACAACTCAATTTCAGCTGGCTCTTTATCCTAATCCTCTTCTTATCAACATCACCATTTCTTCTCAGTGTTTCCTCCGCCGCGGACGGCGGAGGCGGCGCCACCAACCCATTCACCCCGAAGGCCTCTCTGCTTCGCTATTGGGACAAGGAGATCCGCAACAACCTCCCGAAGCCAAACTTCCTCCTCTCAAAGGCGTCCCCGTTAACCGCCGTAGACGCAGCCGCATTCTCAAAACTCGCCGGCTCCGGAGGCGGAATCGCACTCTCTACGCGCCTCCCGGAGTTCTGCGCCGCCGCGAACCTCCTCTGCTTCCCGGACCTTGGAGCCTCGCTCGAGAAGCACGACAAGGACGCCAACTTCGCCGGCTACGGAGACAAGAACTTCACCAACTACGGAACGAGTCGACCCGGTGGTTCCGACGCGTTCAAGAAGTACTCCGACGACGCCAACATCCCCGTCAACGACTTCCGCCGCTACGGCCGCGACTCCGCCGGCCATTCCGAGAGTTTCAGCAGCTACGCCACCGACGGCAATGTTGTCGATCAATCCTTCCACACCTACGGCTCCAGCGCCGCAGGAGGAGGCGGTGATTTCCGCGGCTATGCCTCCGGTGTCAACGTCCCTAACCTGGGGTTCACATCCTACTCTGATCACGCCACCGGAAGAACCCAATCCTTCAATTCATACTCAGAAAACGGCAATGCTGGACAACAATCCTTCACCTCTTATGGCAAAAACGGGAACAAACCCGAGAACACGTTCACAGGGTACGGAACTGAGTCCAACGTTGTCGGGTCCGGGTTCTCTAACTATGCTGAAACCGCCAACGCCGGCAACGACACGTTCAAAGGGTACGGCGTGAATATGAACAACCCAACCAACACTTTCTCAAACTACGCCAGCGGCGGAAACGGCGCCGTGGAGAGCTTCACCACCTACAGAGAGCAATCCAATGTGGGTGCAGATTCTTTCACCTCTTACGCCAAAGGCACCAACGCCGCCAAAGTGGAGTTCAGCAACTACGGAAAATCGTTCAACGAAGGAACTGACACGTTCTCAGGCTACGGAAAAGGTTCCACCGGAAAAACCGAGGTTGGGTTCACTGGCTATGGAGTCAACAACACCTTCAAGGATTACACAAAAGACGGAATGTCATTCGCGAGGTACACGAATGTGAGTTCTGGTTCTGGTTTGGGTTCTTCTCTAGTGAAAACGAAGGATTCTGGTATCAGTGGCAGTTTGGTAAATAAGTGGGTAGAACCGGGCAAATTCTTCAGAGAGAAGATGATAAAAGAAGGTACCGTGATGCCCATCCCTGACATTAGGGATAAAATGCCTAAAAGGTCGTTTTTGCCCCGGACCATATTGTCGAAACTACCCTTCTCTACTTCTAAGATCCCTGAACTGAAGCAGATTTTCAAAGCCTCAGACAACGGTTCCATGGAGAAGATGATGAGAGAGTCATTGCAAGAGTGCGAGAGGGTCCCATCGCCCGGGGAAACGAAACGGTGCGTTGGATCGGTGGAGGACATGATCGACTTTGCAACTTCGGTTTTGGGTCGGAACGTTGCGGTTCGGTCAACCCTGAACGTAAACGGGTCGAAGAAGAATGTGTTGGTGGGTAAGGTTATTGGGATCAATGGTGGAAGGGTCACGCAGTCTGTGTCGTGTCATCAAAGTTTGTTTCCTTATTTGTTGTATTATTGCCATTCGGTTCCGAAGGTTCGGGTTTACGAAGTGGATCTACTTGACCCAAAAAGTAAGGATAAGATTAACCACGGTATTGCTATATGTCACTTGGATACTTCGGCTTGGAGCCCCACTCATGGTGCATTCCTTTCTCTTGGGTCGGGTCCGGGTCGGATTGAAGTTTGTCATTGGATCTTTGAGAATGACATGACTTGGACCATTGCTGATTGA 1929 0.5215 MNKQLNFSWLFILILFLSTSPFLLSVSSAADGGGGATNPFTPKASLLRYWDKEIRNNLPKPNFLLSKASPLTAVDAAAFSKLAGSGGGIALSTRLPEFCAAANLLCFPDLGASLEKHDKDANFAGYGDKNFTNYGTSRPGGSDAFKKYSDDANIPVNDFRRYGRDSAGHSESFSSYATDGNVVDQSFHTYGSSAAGGGGDFRGYASGVNVPNLGFTSYSDHATGRTQSFNSYSENGNAGQQSFTSYGKNGNKPENTFTGYGTESNVVGSGFSNYAETANAGNDTFKGYGVNMNNPTNTFSNYASGGNGAVESFTTYREQSNVGADSFTSYAKGTNAAKVEFSNYGKSFNEGTDTFSGYGKGSTGKTEVGFTGYGVNNTFKDYTKDGMSFARYTNVSSGSGLGSSLVKTKDSGISGSLVNKWVEPGKFFREKMIKEGTVMPIPDIRDKMPKRSFLPRTILSKLPFSTSKIPELKQIFKASDNGSMEKMMRESLQECERVPSPGETKRCVGSVEDMIDFATSVLGRNVAVRSTLNVNGSKKNVLVGKVIGINGGRVTQSVSCHQSLFPYLLYYCHSVPKVRVYEVDLLDPKSKDKINHGIAICHLDTSAWSPTHGAFLSLGSGPGRIEVCHWIFENDMTWTIAD* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo15g0134 642 MobiDBLite consensus disorder prediction 226 260 - -
Amo15g0134 642 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 18 642 - -
Amo15g0134 642 SMART BURP_2 425 641 IPR004873 -
Amo15g0134 642 Pfam BURP domain 427 639 IPR004873 -
Amo15g0134 642 ProSiteProfiles BURP domain profile. 427 641 IPR004873 -
Amo15g0134 642 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 18 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo15g0134 Amo-Chr15 5141548 5144557 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo15g0134 - - gmx:100776642 974.541
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo15g0134 15 5141548 5144557 Amo15g0134 15 5141548 5144557 ECH
Amo05g1905 05 40328363 40330608 Amo15g0134 15 5141548 5144557 hybridization
Amo15g0134 15 5141548 5144557 Amo05g1905 05 40328363 40330608 PCT
Amo05g1905 05 40328363 40330608 Amo15g0134 15 5141548 5144557 PCT