Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3641 ATGGCAGCCTCTCTCTCCCTCCAACTTCACTCGTTCCCTCCAAATCCCACCTCACCTTCGCCATCCTCCAACACCAAAATCACCTTCCAACTCTTCAACTTCAAACCACCACTCCCAAAGAAACCCCACCACACAACAGAGCCGTCCCAATTCCCCACCACCAAGAACCACCGCCATCACCATCACCACCACTACAAGAAGCTGAAACATTTCAAACAGAAAGATGCATTTCCATCCTCCTTACCCATCCACACAAAAAATCCACGCTCTATCTACAAAGACATCAAACGATTCGCGCGCCAAGACAAACTCAAAGAAGCACTTACCATTCTCGATTATGTTGACCAACAGGGAATCCCTGTCAATGCCACCACTTTCTCCGCTCTCATCGCCGCCTGCATTCGCACCAAGTCGCTACAACACGGTAGAGAAGTCCACGTCCATATCCGAATCAACGGCTTCGAAAACAACGAGTTTTTGCGAACGAAGCTTGTTCACATGTACACCTCTTGCGGCGCTTTGGAAGAAGCCAAACAAATCTTTAACGAGTTACCCTGTAACAGTGTGTACCCATGGAATGCGTTGTTAAGAGGGTCTGTGATTGCGGGTAAAAAGCACTACCTTGATGTGCTTAAAGCTTATACTGAGATGAGGGCATTGGGTGTTGAGTTGAATGTGTATACTTTCACTACTGTGATCAAGAGTTTCGCCGGTGCACCTGCCCTTTTCCAGGGCCTCAAGGCTCATGGGTTGTTGATCAAGAATGGTTTGGTTGATAGTTCAATTATTAGGACAAGTTTGATTGATTTATACTTCAAGTGTGGGAGGATCAATCTTGCGCGCCGCGTGTTTGACGAAATTCCCAGCAGGGATGTTGTGGTTTGGGGAGCAATGGTGGCGGGTTTTGTGCATAATAGGCTGCAGAGGGAGGCGTTGGAATATGTGAGGTGGATGGTGGAGGAAGGAGTGGAGGTTAATTCAGTTGTGGTGATGTCAGTTCTTCCTGCAATAGGGGAAGTTTCTGAGCAGCGATTGGGCAAAGAGGTCCATGCTTATGTGGTGAAGACGAAGGAGTACTATAGGCGAGTGCCTATTCAGTCTGCCTTGATTGATATGTATTGCAAATGTGGGGATATGAGTTCGGCTAGGCGAGTTTTTTATAGCTCGCCGGAGAGGAATTTGGTTTGTTGGACGGCTTTAATGTCCGGTTATGCTTGGAATGGTAGGTTGGAGCAGGCACTGAGGTCGACTATTTGGATGCAGCAAGAAGGGTTCAGGCCTGATGTTGTGACAGTTGCAACTGTTCTTCCAGTATGTGCTCAGTTGAGGGCTTTGAAACAGGGGAAGCAGGTTCATGCTTATGCTTTGAAGCATTGGTTTTTGCCTAACGCGTCCATAACTAATTCGTTGATGGTAATGTACTCGAAGTGTGGCGTGATTGAATACTCTGAAAGACTATTTGACAGTATGGAGAAAAGGACAGTTATTTCATGGACAGCCATGATTGATTCATATGTAGAAAATGGGTATCATCATGAAGCACTTGATGTGATAAGGTCAATGCAATCATCAAAGCATAGGCCGGACTCAGTTGCAATAGCAAGGATGCTGAGTGTTTGTGGTGAGCTAAAACTTTTGAAGCATGGAAAAGAGATTCATGCACAGCTCTTGAAAAAGGATTTCGCAAAAGTCCCTTTTGTTTCTGCAGAACTTATCAATATGTATGGGACTTTGGGAGAGGTTAATAAGGCAAAGTTGGTATTTGATGCTGTCCCTGTTAAAGGTTCAATGACATGGACTGCTCTTATTAGGGCCTATGGAAATAATGAATTGTATGAAGGTGCAATTGCTCTTTTCGATCGGATGACATCGAGAGGTTCTACTCCGACGCATTTCACTTTTGACGCCATGCTATCTATCTTCGACAGAGCTGGATTTGTTGATGATGCTTATAGGATATTCAAGTTAATGACTAGATATAAAATTGAACCATCTAAAGAACATTTTGATATAATGGTCCGACTACTTACCCATGATGGTCAACTGGAGAAAGCTCAAAAACTTATACAGATGAGTTCTGTTGCATAG 2088 0.4464 MAASLSLQLHSFPPNPTSPSPSSNTKITFQLFNFKPPLPKKPHHTTEPSQFPTTKNHRHHHHHHYKKLKHFKQKDAFPSSLPIHTKNPRSIYKDIKRFARQDKLKEALTILDYVDQQGIPVNATTFSALIAACIRTKSLQHGREVHVHIRINGFENNEFLRTKLVHMYTSCGALEEAKQIFNELPCNSVYPWNALLRGSVIAGKKHYLDVLKAYTEMRALGVELNVYTFTTVIKSFAGAPALFQGLKAHGLLIKNGLVDSSIIRTSLIDLYFKCGRINLARRVFDEIPSRDVVVWGAMVAGFVHNRLQREALEYVRWMVEEGVEVNSVVVMSVLPAIGEVSEQRLGKEVHAYVVKTKEYYRRVPIQSALIDMYCKCGDMSSARRVFYSSPERNLVCWTALMSGYAWNGRLEQALRSTIWMQQEGFRPDVVTVATVLPVCAQLRALKQGKQVHAYALKHWFLPNASITNSLMVMYSKCGVIEYSERLFDSMEKRTVISWTAMIDSYVENGYHHEALDVIRSMQSSKHRPDSVAIARMLSVCGELKLLKHGKEIHAQLLKKDFAKVPFVSAELINMYGTLGEVNKAKLVFDAVPVKGSMTWTALIRAYGNNELYEGAIALFDRMTSRGSTPTHFTFDAMLSIFDRAGFVDDAYRIFKLMTRYKIEPSKEHFDIMVRLLTHDGQLEKAQKLIQMSSVA* 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3641 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 595 629 IPR002885 -
Amo14g3641 695 TIGRFAM PPR: pentatricopeptide repeat domain 265 293 IPR002885 -
Amo14g3641 695 TIGRFAM PPR: pentatricopeptide repeat domain 496 530 IPR002885 -
Amo14g3641 695 TIGRFAM PPR: pentatricopeptide repeat domain 598 630 IPR002885 -
Amo14g3641 695 TIGRFAM PPR: pentatricopeptide repeat domain 632 665 IPR002885 -
Amo14g3641 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 494 528 IPR002885 -
Amo14g3641 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 393 427 IPR002885 -
Amo14g3641 695 Gene3D Tetratricopeptide repeat domain 566 693 IPR011990 GO:0005515
Amo14g3641 695 Gene3D Tetratricopeptide repeat domain 365 441 IPR011990 GO:0005515
Amo14g3641 695 Gene3D Tetratricopeptide repeat domain 203 364 IPR011990 GO:0005515
Amo14g3641 695 Gene3D Tetratricopeptide repeat domain 89 202 IPR011990 GO:0005515
Amo14g3641 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 630 664 IPR002885 -
Amo14g3641 695 Pfam PPR repeat family 393 439 IPR002885 -
Amo14g3641 695 Pfam PPR repeat family 595 639 IPR002885 -
Amo14g3641 695 PANTHER PPR CONTAINING PLANT-LIKE PROTEIN 49 688 - -
Amo14g3641 695 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 291 325 IPR002885 -
Amo14g3641 695 Pfam PPR repeat 496 524 IPR002885 -
Amo14g3641 695 Pfam PPR repeat 468 493 IPR002885 -
Amo14g3641 695 Pfam PPR repeat 265 291 IPR002885 -
Amo14g3641 695 Pfam PPR repeat 367 388 IPR002885 -
Amo14g3641 695 MobiDBLite consensus disorder prediction 1 63 - -
Amo14g3641 695 Gene3D Tetratricopeptide repeat domain 442 565 IPR011990 GO:0005515
Amo14g3641 695 PANTHER OS07G0578800 PROTEIN-RELATED 49 688 IPR045215 GO:0003723|GO:0009451
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3641 Amo-Chr14 141123734 141125821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g3641 78 690 Glycoside Hydrolase AT3G49170 27.143 3.19e-75 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3641 - - gmx:100809249 984.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0639 19 9914916 9916722 Amo14g3641 14 141123734 141125821 PCT