Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g3409 ATGTCAGGAATTGACATGGCAGTTAGTAAACCCGAGGTGCGTATCTGCTTGTATGATATAATGTTTAACTTCTTGCTTCAGATTATGCAGCCGTATATCTGGCTTCAGACACCAGATGGTGCAATACAACAAGTGGAACAGGAAATTGCAATGTTTTGCCCTTTTATTTGTCAAGAAGTAATAAAAAAGGCACGGGATCTTCAAAGAACTGTGCAATATGTCTTCCTCAACGGGATTATTGCCGATTTCATCAATTACCAGGTCGCTCAAACAAGATGCACTTTAAATGGAAAGGAGCGGAAATCTTATGATGAGAAATTCATGCGGATGGACACGAAGCAGTTATGTGAGTTGACATCTGCTGCAGACAGCCTTCAGTTGAAAACATTGGTTGATCTTATAAGCCGTACACTTGCTCGAATAATTGAAGGAAAATCCCCTGAGGAAATACACGGCATATTTAATTTGCCAGATGATCTTACAGAGGAAAAGAAATTGGAGCCCTATAAAAACACAACTGCTGATCCGAGGATCAGGCTTTTGAACCGCTTGTATGCTAAGAAAAGGAAAGAGCTGAAGGAGCATGAGAGGCTAAAGAATGTTGAAGTTGAAGAAGAGAATGTGGATGATCGTTCAGTCGATGACCTTTTGTCTTTTATTAATGGAAATGATGCAGATCCAAAGGAGATGAAAAATTCTAAGAATAAAAAGAAAAACGGAAGAAGAAAAGAGCAACAGACGAGCTCTTCTTTAAAGGAAGCTTCTGAACTGAACAATAAGGAGATAAATGGTCATAATATCAGACCCCAAACTGATGGAGCTAATGGAGTTTCCGAGGCCTCACAGTCTAATACAGAAGACAGCACTTTTGTTCCTAGAGAGTTTGATGATGGAGATATAGATGAGGAGATCGATCCTGCATTACAGGAAAAACTTGACAGAAACAAGATGTAA 954 0.3941 MSGIDMAVSKPEVRICLYDIMFNFLLQIMQPYIWLQTPDGAIQQVEQEIAMFCPFICQEVIKKARDLQRTVQYVFLNGIIADFINYQVAQTRCTLNGKERKSYDEKFMRMDTKQLCELTSAADSLQLKTLVDLISRTLARIIEGKSPEEIHGIFNLPDDLTEEKKLEPYKNTTADPRIRLLNRLYAKKRKELKEHERLKNVEVEEENVDDRSVDDLLSFINGNDADPKEMKNSKNKKKNGRRKEQQTSSSLKEASELNNKEINGHNIRPQTDGANGVSEASQSNTEDSTFVPREFDDGDIDEEIDPALQEKLDRNKM* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g3409 317 SUPERFAMILY Skp1 dimerisation domain-like 101 170 IPR036296 GO:0006511
Amo14g3409 317 MobiDBLite consensus disorder prediction 250 289 - -
Amo14g3409 317 MobiDBLite consensus disorder prediction 218 317 - -
Amo14g3409 317 Pfam Skp1 family, dimerisation domain 128 164 IPR016072 GO:0006511
Amo14g3409 317 Gene3D Potassium Channel Kv1.1; Chain A 31 174 IPR011333 -
Amo14g3409 317 Coils Coil 178 205 - -
Amo14g3409 317 PANTHER SKP1-LIKE PROTEIN 20 27 279 - -
Amo14g3409 317 SMART skp1_3 30 127 IPR001232 GO:0006511
Amo14g3409 317 PANTHER SKP1 27 279 IPR016897 GO:0006511
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g3409 Amo-Chr14 136860118 136862977 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g3409 - - gmx:100782740 354.369
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g3409 14 136860118 136862977 Amo14g3409 14 136860118 136862977 ECH
Amo14g3409 14 136860118 136862977 Amo02g0143 02 1763961 1769398 PCT
Amo02g0143 02 1763961 1769398 Amo14g3409 14 136860118 136862977 PCT