Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2922 ATGCAGAAATTCTCCACAGTAGTAATGGACACCTCGACACTCCTTTCTTCTCCTTCTTCTTCTTCTTCCAGTTCTCTTTCTCCTTATCCCTTCCACAAGCGGAGCATCTTCACCACCGCAACTTCTTCCTCTTCCTTCAAGGAAGACACCTACTTCCTCTCCCAACTCAAACCCTCTGAGAACAAATCACTTCAAGAACTCAAGAACAAGCTCAACTCCATTGCTTCTTCTGGAGAATCCAACAACAACAATGACTATTATTCGATGTGGGGCATTCCCTTGCTCACCGGAACTGAAAACGCCGACGTCATTCTCCTAAAGTTCCTCAGAGCAAGAGACTTCAGAGTCTCTGATTCCCTCGCCATGCTCCTCAAATCCCTCTCATGGAGGAAGGAATTCGGTGCCGACGCCATTGTTGGTGAGGAGCTAGGCTTCAAGGATCTTGAAGGAGTAGTAGCTTATATGCAAGGCTATGACAGAGAAGGCCACCCTGTGTGTTACAATGATTATGGCTTGTTCAAAGATAAGGGAATGTATGAGAAGGTTTTTGGCGGTGGTGGTGATGGTGGTGATGATGAAGAGAAGCTGAACAAGTTCTTGAGATGGAGGGTTCAGGTTCTTGAGAGGGGTATTAAGCTTCTGAATTTTAAGCCTGGTGGGGTTAATTCTCTCATTCAGGTTACTGATCTTAAGGACATGCCAAAGAGAGAGTTAAGGGTTGCTTCTAATCACATTTTGTCTTTGTTTCAAGATAATTATCCTGAAATGGTGGCTCGCAAGATTTTCATCAATGTGCCATGGTACTTCTCAGTGCTGTATTCAATGTTCTGTCCATTTCTGACCCCAAGAACAAAGAGCAAGTTTGTGATCTCTAAAGAAGGAAATGCTGCTGAGACACTTTACAAATTTATCAGGCCTGAGGATATTCCTGTAAGGTATGGAGGACTGAGTAAGACTAGTGATTTGCAAAATGGTCCCCCAAAACCTGCTTCTGAGTTCACAGTTAAAGGAGGAGAGAAAGTTAACATACAAATTGAAGGAATTGAGAGTGGTGCAAGTATCACATGGGACATAGTGGTGGGAGGTTGGGACTTGGAATACAGTGCTGAGTTTGTCCCAAATGAAGAAGGCAGCTACACCATAGCAGTTGAGAGGGCAAGGAAAGTTGAAGCCTCAGAAGAAGCCATCCACAACACATTCACTTCAAAGGAATCAGGCAAATTGGTGCTCTCTGTTGATAACAGTGCCTCTAGGAAGAAAAAAGTTGCTGCTTACCGCTATTTTGTGCAGTTAAATAATTAA 1302 0.437 MQKFSTVVMDTSTLLSSPSSSSSSSLSPYPFHKRSIFTTATSSSSFKEDTYFLSQLKPSENKSLQELKNKLNSIASSGESNNNNDYYSMWGIPLLTGTENADVILLKFLRARDFRVSDSLAMLLKSLSWRKEFGADAIVGEELGFKDLEGVVAYMQGYDREGHPVCYNDYGLFKDKGMYEKVFGGGGDGGDDEEKLNKFLRWRVQVLERGIKLLNFKPGGVNSLIQVTDLKDMPKRELRVASNHILSLFQDNYPEMVARKIFINVPWYFSVLYSMFCPFLTPRTKSKFVISKEGNAAETLYKFIRPEDIPVRYGGLSKTSDLQNGPPKPASEFTVKGGEKVNIQIEGIESGASITWDIVVGGWDLEYSAEFVPNEEGSYTIAVERARKVEASEEAIHNTFTSKESGKLVLSVDNSASRKKKVAAYRYFVQLNN* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2922 433 Pfam CRAL/TRIO, N-terminal domain 64 124 IPR011074 -
Amo14g2922 433 Gene3D GOLD domain 333 430 - -
Amo14g2922 433 Gene3D - 52 132 - -
Amo14g2922 433 Pfam CRAL/TRIO domain 149 315 IPR001251 -
Amo14g2922 433 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 332 430 IPR036598 -
Amo14g2922 433 PANTHER PATELLIN-1 21 430 IPR044834 GO:0008289
Amo14g2922 433 SUPERFAMILY CRAL/TRIO domain 148 319 IPR036865 -
Amo14g2922 433 SMART sec14_4 147 318 IPR001251 -
Amo14g2922 433 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 141 321 IPR001251 -
Amo14g2922 433 Gene3D - 148 332 IPR036865 -
Amo14g2922 433 SUPERFAMILY CRAL/TRIO N-terminal domain 38 141 IPR036273 -
Amo14g2922 433 CDD SEC14 145 316 IPR001251 -
Amo14g2922 433 SMART CRAL_TRIO_N_2 101 126 IPR011074 -
Amo14g2922 433 ProSiteProfiles GOLD domain profile. 297 431 IPR009038 -
Amo14g2922 433 PANTHER PATELLIN-6 21 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2922 Amo-Chr14 124653710 124657114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2922 107 287 Acyl Lipid Metabolism Gene Families AT5G47730 26.842 1.77e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2922 - - cpap:110822882 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2922 14 124653710 124657114 Amo14g2922 14 124653710 124657114 ECH
Amo14g2922 14 124653710 124657114 Amo04g1850 04 85449102 85452908 hybridization
Amo14g2922 14 124653710 124657114 Amo12g2423 12 106686441 106690915 PCT
Amo14g2922 14 124653710 124657114 Amo02g2625 02 82557924 82561918 PCT
Amo12g2423 12 106686441 106690915 Amo14g2922 14 124653710 124657114 PCT
Amo02g2625 02 82557924 82561918 Amo14g2922 14 124653710 124657114 PCT