Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g2724 ATGCACAACACAGAGGAGAAAGCCGTCGTCTACTGGCGCAAAATCCCACACCTCAAATGCGACGCCGTTTCCACCAAACCCTTCCATAATTCTTCCACCCTCACCTTCTCCTCCGCCACCGCCGATGCCACCCGCTGCAAATTCGCCTCCGTTTCGGTTGCTGAAACCAAACTCCACCACGATTTCGCTCCCACGGCAACTCAGATCCTTAAGCACCCGCTCGCCGTCATTGCTTTTCTTCCCCGAGATGTCTCCCTCTTCTCCGCCGGAGCCATTGCCGGCGCCGCCGCTAAGACCGTCACAGCTCCCCTCGACCGCATCAAACTTCTCATGCAGACTCATGGTGTACGGGTCGGGCAAGAGAGTGCTAAGAAGGCAATGAGTTTCATTGAGGCTATAACAGTTATAGCAAAGGAAGAAGGCATTAAAGGTTACTGGAAGGGAAACCTCCCCCAGGTGATTCGGGTTGTTCCTTATAGTGCTGTCCAGCTTTTTGCATATGAAATTTACAAGGTTGTCCTTAATTATATTTTTGAAGTTCTAATATCAAGTATCACCTGTCCATGCATAATGTTCTGCTTTTTGGATCTACAGAAAATATTCAGGGGACAGAATGGTGAGCTCTCTGTTGTGGCAAGACTTACAGCAGGTGCTTTTGCTGGCATGACATCCACTTTTATAACTTACCCATTAGATGTCCTGAGATTGCGATTAGCTGTTGAACCTGGTTATCGAACTATGTCACAGGTTGCCCTGGGCATGATAAGGGAGGAAGGAATTGCATCTTTCTACAGGGGCCTTGGGCCTTCGCTTATTGCAATAGCTCCATATATTGCAGCAAACTTTTGTGTTTTTGACCTATTGAAGAAGTCATTGCCCGAGAAATATCAAAAGAGAACCGAAACATCAATACTCACTGCCTTGCTTTCGGCCTCGCTTGCCACACTTACATGCTATCCTTTGGACACTGTGCGAAGACAAATGCAATTGAAGGGTACGCCTTATACAACGGTATTAGAGGCCCTTTCAGGTATTGTGGCACGAGATGGAGTTGTTGGCTTATATCGGGGATTTCTGCCTAATGCTCTAAAAACCCTACCAAACAGCAGCATCAAGCTTACCACATATGACCTTGTTAAGCGCCTAATTGCTGCTAGTGAGAAAGAGTTTCAAACAATTACAGAGGAAAACCGCAACAAACAACAGAACATCAACAGTCAAGGATAA 1227 0.4678 MHNTEEKAVVYWRKIPHLKCDAVSTKPFHNSSTLTFSSATADATRCKFASVSVAETKLHHDFAPTATQILKHPLAVIAFLPRDVSLFSAGAIAGAAAKTVTAPLDRIKLLMQTHGVRVGQESAKKAMSFIEAITVIAKEEGIKGYWKGNLPQVIRVVPYSAVQLFAYEIYKVVLNYIFEVLISSITCPCIMFCFLDLQKIFRGQNGELSVVARLTAGAFAGMTSTFITYPLDVLRLRLAVEPGYRTMSQVALGMIREEGIASFYRGLGPSLIAIAPYIAANFCVFDLLKKSLPEKYQKRTETSILTALLSASLATLTCYPLDTVRRQMQLKGTPYTTVLEALSGIVARDGVVGLYRGFLPNALKTLPNSSIKLTTYDLVKRLIAASEKEFQTITEENRNKQQNINSQG* 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g2724 408 Coils Coil 383 403 - -
Amo14g2724 408 Gene3D Mitochondrial carrier domain 84 383 IPR023395 -
Amo14g2724 408 SUPERFAMILY Mitochondrial carrier 86 378 IPR023395 -
Amo14g2724 408 PANTHER SOLUTE CARRIER FAMILY 25 7 396 - -
Amo14g2724 408 Pfam Mitochondrial carrier protein 207 294 IPR018108 -
Amo14g2724 408 Pfam Mitochondrial carrier protein 303 384 IPR018108 -
Amo14g2724 408 Pfam Mitochondrial carrier protein 87 175 IPR018108 -
Amo14g2724 408 PANTHER ADP/ATP CARRIER PROTEIN 7 396 - -
Amo14g2724 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 81 173 IPR018108 -
Amo14g2724 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 291 IPR018108 -
Amo14g2724 408 PRINTS Mitochondrial carrier protein signature 86 99 IPR002067 GO:0055085
Amo14g2724 408 PRINTS Mitochondrial carrier protein signature 99 113 IPR002067 GO:0055085
Amo14g2724 408 PRINTS Mitochondrial carrier protein signature 223 241 IPR002067 GO:0055085
Amo14g2724 408 PRINTS Mitochondrial carrier protein signature 307 329 IPR002067 GO:0055085
Amo14g2724 408 PRINTS Mitochondrial carrier protein signature 264 282 IPR002067 GO:0055085
Amo14g2724 408 ProSiteProfiles Solute carrier (Solcar) repeat profile. 302 382 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g2724 Amo-Chr14 116197966 116201787 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g2724 5 402 Organic Solute Cotransporters AT3G51870 61.139 2.10e-176 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g2724 K14684 - gmx:100778912 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g2724 14 116197966 116201787 Amo14g2724 14 116197966 116201787 ECH
Amo14g2724 14 116197966 116201787 Amo12g2085 12 97329590 97333886 PCT
Amo12g2085 12 97329590 97333886 Amo14g2724 14 116197966 116201787 PCT