Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1780 ATGGACAAAAACATTGTGCTGACAAAGCCATTCTCGTTGGAGAAAGAATCGGATGGTGATTCTGATTATAGAGCTCCAAATCTTATGAAACGAATACTGAGTCTATTTAAGAATGTGCGGCCAGGATCTGATCTTACTCGCTTTCAGCTGCCAGCAGAGTTCAACATGCCAAAGTCACAACTCCAATGCTATGGTGAAGAGGTATATTGTGGTGGTTGTGACATGCTAAGCAGATGCAACAATGGAGAAAGTCCAGTTGATAGGTTCATATCAGTTGTAGCATGGAGCATTTCTACAAGACGCCCTGTCATTTTTGGAGTTGCTCCTTACAATCCCATTCTTGGAGAGACACACCATGTTTCCACACCAAATCTTAATGTCTTGCTAGAACAGGTTTCTCACCACCCTCCGGTGACTGCACTTCATGCAACAAATGAGAAGGAAAAGATAGAAACAATATGGTGTAGTTATGTTGTTCCAAAGTTCAATGGTGCCGCAGTGGAAGGTCAAGTGCATGGTAAAAGAGAATTGAAGCTCCACAATCATGGAGAGACATATGAAATGAATGCTCCTTATCTCATGATCAGGTTTCTTCCAGTTCCTAGCTGTGATTGGGTCGGCAATGTCCATATCCGGTGCCCGGAATCTGCCATTGAGGCAGAGTTATGCTACACAAGCCACACTCTGTTCGGATTCCGGGCAAGCCGGAAATCAATAAAGGGGAAGATCATTGATTCAATATCAACGAAGATTCTATATGAAATTAATGGTAATTGGGATAGTATTGTGACAGCGAAGGATACAAATAATGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTCATTTCGGGGCTCCAAACTCCTGTTGTGAAGGACTCTGAGTGTGTGTGGGGAAGCGAATCAGCAGTTGTATGGAGTGAAGTAAGCGAAGCAATCATGAACAAAGAGTGGGAAAAAGCAACAGAAGCAAAGAAATCTGTGGAGGAAAGGCAAAGGGAGCTTTCAAGAGAAAGGATCACAAAAGGAGAAACTTGGCTTCCTAAGCATTTCACTCTCTCTCACTCCAAAGAAGGAGGCTGGAATTGTTTTCCAATTCAAAACTGGGTCCCACCTTCTCCTATTCAGACCTTGTAA 1137 0.4283 MDKNIVLTKPFSLEKESDGDSDYRAPNLMKRILSLFKNVRPGSDLTRFQLPAEFNMPKSQLQCYGEEVYCGGCDMLSRCNNGESPVDRFISVVAWSISTRRPVIFGVAPYNPILGETHHVSTPNLNVLLEQVSHHPPVTALHATNEKEKIETIWCSYVVPKFNGAAVEGQVHGKRELKLHNHGETYEMNAPYLMIRFLPVPSCDWVGNVHIRCPESAIEAELCYTSHTLFGFRASRKSIKGKIIDSISTKILYEINGNWDSIVTAKDTNNGEVRVIYDAKEVISGLQTPVVKDSECVWGSESAVVWSEVSEAIMNKEWEKATEAKKSVEERQRELSRERITKGETWLPKHFTLSHSKEGGWNCFPIQNWVPPSPIQTL* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1780 378 ProSitePatterns Oxysterol-binding protein family signature. 130 140 IPR018494 -
Amo14g1780 378 Gene3D - 114 289 - -
Amo14g1780 378 Gene3D - 299 368 - -
Amo14g1780 378 Pfam Oxysterol-binding protein 35 357 IPR000648 GO:0008289
Amo14g1780 378 SUPERFAMILY Oxysterol-binding protein-like 30 363 IPR037239 -
Amo14g1780 378 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 1 376 IPR000648 GO:0008289
Amo14g1780 378 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 1 376 - -
Amo14g1780 378 Coils Coil 318 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1780 Amo-Chr14 36778388 36793588 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1780 K22285 - gmx:100780927 554.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1780 14 36778388 36793588 Amo04g0681 04 19612964 19623424 hybridization