Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0681 TATTATCAACTTCCAACGAACTCTTATCAAATTGAAGCAGCACCAATATTGTTACTGTTGATTTTTTTCGTCATCACTGTACTACTACTTCTACCAATTTCAATTATGGACAAAAACATTGTGCTAACAAAGCCATTCTCGTTGGAGAAAGAATCGGATGGTGATTCTGATTATAGAGCTCCTAATCTTATGAAACGTATACTAAGTCTATTTAAGAATGTGCGGCCAGGATCTGATCTTACTCGCTTTCAGCTGCCAGCAGAGTTCAACATGCCAAAGTCACAACTCCAATGCTATGGTGAAGAGGTATATTGTGCTGCTTGTGACATGCTAAGCAGATGCAACAATGGAGAAAGTCCAATTGATAGGTTCATATCAGTTGTAGCATGGAGCATTTCTACAAGACGCCCTGTCATTTTTGGAGTTGCTCCTTACAATCCCATTCTTGGAGAGACACACCATGTTTCCACACCAAATCTTAATGTCTTGCTAGAACAGGTTTCTCACCACCCTCCGGTGACTGCACTTCATGCAACAAATGAGAAGGAAAAGATAGAAACAATATGGTGTAGTTATGTTGTTCCAAAGTTCAATGGTGCCGCGGTGGAAGGTCAAGTGCATGGTAAAAGAGAACTGAAGCTCCACAATCATGGAGAGACATATGAAATGAATGCTCCTCATCTCATGATCAGGTTTCTTCCAGTTCCTAGCTGTGATTGGGTCGGCAATGTCCATATCCGGTGCCCGGAATCTGCCATTGAGGCAGAGTTATGCTACACAAGCCACACACTGTTCGGATTCCGGGCAAGCCGGAAATCAATAAAGGGGAAGATCATTGATTCAATATCAACAAAGATTCTGTATGAAATTAATGGTAATTGGGATAGTATTGTGACAGCGAAGGATACAAATAATGGAGAAGTGAGAGTGATATATGATGCAAAAGAAGTCATTTCAGGGCTCCAAACTCCTGTTGTGAAGGACTCTGAGTGTGTGTGGGGAAGTGAATCGGCAGTTGTATGGAGTGAAGTAAGCGAAGCAATCATGAAGAAAGAGTGGGAAAAAGCAACAGAAGCAAAGAAATGTGTGGAGGAAAGGCAAAGGGAGCTTTCAAGAGAAAGGATCACAAAAGGAGAAACATGGCTTCCTAAGCATTTCACACTCTCTCACTCCAAAGAAGGAGGCTGGAATTGTTTTCCAATTCAAAACTGGGTCCCACCCTCTCCTATTCAGACCTTGTAA 1242 0.4187 YYQLPTNSYQIEAAPILLLLIFFVITVLLLLPISIMDKNIVLTKPFSLEKESDGDSDYRAPNLMKRILSLFKNVRPGSDLTRFQLPAEFNMPKSQLQCYGEEVYCAACDMLSRCNNGESPIDRFISVVAWSISTRRPVIFGVAPYNPILGETHHVSTPNLNVLLEQVSHHPPVTALHATNEKEKIETIWCSYVVPKFNGAAVEGQVHGKRELKLHNHGETYEMNAPHLMIRFLPVPSCDWVGNVHIRCPESAIEAELCYTSHTLFGFRASRKSIKGKIIDSISTKILYEINGNWDSIVTAKDTNNGEVRVIYDAKEVISGLQTPVVKDSECVWGSESAVVWSEVSEAIMKKEWEKATEAKKCVEERQRELSRERITKGETWLPKHFTLSHSKEGGWNCFPIQNWVPPSPIQTL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0681 413 Gene3D - 334 403 - -
Amo04g0681 413 SUPERFAMILY Oxysterol-binding protein-like 65 398 IPR037239 -
Amo04g0681 413 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 36 411 IPR000648 GO:0008289
Amo04g0681 413 Gene3D - 149 324 - -
Amo04g0681 413 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 4C 36 411 - -
Amo04g0681 413 ProSitePatterns Oxysterol-binding protein family signature. 165 175 IPR018494 -
Amo04g0681 413 Pfam Oxysterol-binding protein 70 392 IPR000648 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0681 Amo-Chr4 19612964 19623424 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0681 K22285 - gmx:100780927 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1780 14 36778388 36793588 Amo04g0681 04 19612964 19623424 hybridization