Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1609 GTTTGCTGTAAATCAAAATTTAATCTAAAAATTTATGATTATGTGACCGGTGCCATAAGTAACAGTGAAGTTAGTGCTGCCTGTGCATTCTGCTTGGAGTGTTTGAGCGAATGTGAAATTGGTGAACAGAAAACCGTTCGTGTATACGCTGATGGCATTTACGACCTCTTTCATTTCGGCCATGCCCGTTCTCTCGAGCAAGCCAAAAAACTGTTTCCAAACACATATCTGCTTGTTGGATGCTGCAATGATGAGATCACACACAAGTATAAGGGAAAAACTGTCATGACTGACAAGGAACGCTATGAATCTCTTCGCCACTGCAGGTGGGTTGATGAAGTTATACCAGATGCGCCATGGGTAATCACACAGGAATTCATTGACAAGCATCAAATTGACTATGTGGCTCATGATTCTCTTCCTTATGCTGATACAAGTGGAGCTGGAAAGGATGTCTATGAATATGTTAAGTCTATTGGAAAGTTTAAGGAAACAAAGCGGACTGATGGAATTTCTACTTCAGATATCATAATGAGAATAATCAAAGATTATAATCAGTATGTAATGCGTAACTTGGACCGTGGTTATACCAGAAAGGATCTGGGTGTCAGCTATGTCAAGGAGAAGAGGTTGAGAATGAACATGGGACTTAAAAAATTGCGTGAGAGAGTGAAGAAGCAGCAAGAGACAGTGGGAAAGAAGGTAACAATGTTGATAATGATCATAGCTATTTGCGTCGACTCTATTTACGTCATAAGTTGTAGGCATGTGCTTATTGCGTGGTTCTTAACAATCAGAGACAGAATTCAAGAAAGATTGAGAGCGCAGCAGATAAAATCTCTTCTT 846 0.3983 VCCKSKFNLKIYDYVTGAISNSEVSAACAFCLECLSECEIGEQKTVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHKYKGKTVMTDKERYESLRHCRWVDEVIPDAPWVITQEFIDKHQIDYVAHDSLPYADTSGAGKDVYEYVKSIGKFKETKRTDGISTSDIIMRIIKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRMNMGLKKLRERVKKQQETVGKKVTMLIMIIAICVDSIYVISCRHVLIAWFLTIRDRIQERLRAQQIKSLL 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1609 282 CDD CCT 44 195 IPR041723 -
Amo14g1609 282 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 47 114 IPR004821 GO:0003824|GO:0009058
Amo14g1609 282 Gene3D HUPs 33 237 IPR014729 -
Amo14g1609 282 Pfam Cytidylyltransferase-like 49 178 IPR004821 GO:0003824|GO:0009058
Amo14g1609 282 SUPERFAMILY Nucleotidylyl transferase 47 179 - -
Amo14g1609 282 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 40 281 - -
Amo14g1609 282 PANTHER CYTIDYLYLTRANSFERASE 40 281 IPR045049 GO:0004105|GO:0006657
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1609 Amo-Chr14 29261244 29268428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1609 72 282 Acyl Lipid Metabolism Gene Families AT2G32260 68.468 5.69e-106 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1609 K00968 - gmx:100786249 409.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1609 14 29261244 29268428 Amo04g0481 04 9805201 9811166 hybridization