Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0481 ATGGAAGCCGAAGAGGAATGTGAAATTGGTGATCAGAAAACCGTTCGTGTATACGCTGATGGCATTTACGACCTCTTTCATTTCGGCCATGCCCGTTCTCTCGAGCAAGCCAAAAAACTGTTTCCAAACACATATCTGCTTGTTGGATGCTGCAATGATGAGATCACACACAAGTATAAGGGAAAAACTGTTATGACTGACAAGGAACGCTATGAATCTCTTCGCCACTGCAGGTGGGTTGATGAAGTTATACCAGATGCGCCATGGGTAATCACACAGGAATTCATTGACAAGCATCAAATTGACTATGTGGCTCATGATTCTCTTCCTTATGCTGATACAAGTGGAGCTGGAAAGGATGTCTATGAATATGTTAAGTCTATTGGAAAGTTTAAGGAAACAAAGCGGACCGATGGAATTTCTACTTCAGATATCATAATGAGAATAATCAAAGATTATAATCAGTATGTAATGCGTAACTTGGACCGTGGTTATACCAGAAAGGATCTGGGTGTCAGCTATGTCAAGGAGAAGAGGTTGAGAATGAACATGGGACTTAAAAAATTGCGTGAGAGAGTGAAGAAGCAGCAAGAGACAGTGGGAAAGAAGATACAAACAGTAGCGGGAATGAGGCGTACTGAATGGATYGAAAATGCCGATCGATTGGTAGCTGGTTTCCTCGAAATGTTTGAAGAAGGCTGCCACAAAATGGGAACAGCAATCAGAGACAGAATTCAAGAAAGATTGAGAGCGCAGCAGATAAAATCTCTTCTTTATGATGAGTGGGAAGAAGATGATGATGATGATGAATTTGGTGATGATGAATCTGCAGAGTACTGCAGTAGTTGA 849 0.4134 MEAEEECEIGDQKTVRVYADGIYDLFHFGHARSLEQAKKLFPNTYLLVGCCNDEITHKYKGKTVMTDKERYESLRHCRWVDEVIPDAPWVITQEFIDKHQIDYVAHDSLPYADTSGAGKDVYEYVKSIGKFKETKRTDGISTSDIIMRIIKDYNQYVMRNLDRGYTRKDLGVSYVKEKRLRMNMGLKKLRERVKKQQETVGKKIQTVAGMRRTEWIENADRLVAGFLEMFEEGCHKMGTAIRDRIQERLRAQQIKSLLYDEWEEDDDDDEFGDDESAEYCSS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0481 282 SUPERFAMILY Nucleotidylyl transferase 16 148 - -
Amo04g0481 282 MobiDBLite consensus disorder prediction 262 282 - -
Amo04g0481 282 PANTHER CYTIDYLYLTRANSFERASE 5 279 IPR045049 GO:0004105|GO:0006657
Amo04g0481 282 Coils Coil 186 206 - -
Amo04g0481 282 MobiDBLite consensus disorder prediction 262 276 - -
Amo04g0481 282 Gene3D HUPs 2 232 IPR014729 -
Amo04g0481 282 CDD CCT 13 164 IPR041723 -
Amo04g0481 282 Pfam Cytidylyltransferase-like 18 147 IPR004821 GO:0003824|GO:0009058
Amo04g0481 282 PANTHER CHOLINE-PHOSPHATE CYTIDYLYLTRANSFERASE 2-LIKE ISOFORM X1 5 279 - -
Amo04g0481 282 TIGRFAM cyt_tran_rel: cytidyltransferase-like domain 16 83 IPR004821 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0481 Amo-Chr4 9805201 9811166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0481 41 271 Acyl Lipid Metabolism Gene Families AT2G32260 78.448 9.99e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0481 K00968 - gmx:100786249 493.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1609 14 29261244 29268428 Amo04g0481 04 9805201 9811166 hybridization