Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1607 ATGATGAAATTTTTAATCTCATTCTTACCCTTTTTCTTCTTGGTGGTGGTACAACAAGAAGCCACTTGCTTCAATCAACACAAAGAACTTTCTCATAATATTAGAAACAAACTCAAGGACACGAGCGGAGCACGTGACAGCAGCGACGCAATTATAAAGGCATTGGAGGATGCATTCAGTTTGGAGAGTGAGGCGGAGCTGCTTCCGGGGGTTAAAGACCTTGGGGGTGTATTGGTKGACCTGCAAGGTGGGAACTACACAATTAGCAAGCCCATCAAATTCCCTTCTTCTGCTGCTGGCAATCTTGTGGTACAAGGAGGAACGTTGAGAGCTTCTGATGCATTTCCCACTGATGGCCATCTAGTTGAGTTATGGGCATCTAGTTCCCAAAAGCTCTCGAAAACAGCATCATTTGATGACTTGTACAACAAGAAACTTCAGCAACCTAAAGGGATTTACTACGAAGACATAACATTCCGTGACATTCTATTCGATTCGGGCTACCATGGAGGAGGAATCTTTGTAGTTGATTCGGCTAGGATCCGAATCAACAACTGTTTCTTCCTCCATTTCACTACAGAGGGAATCCTAGTCCAAGGTGGCCACGAAACTTACATATCTAGCTGCTTTCTTGGGCAACACTCAACCGTAGGMGGGGACTCCGGCGAGCGACAATTCTCGGGAACTGCGATTGAACTTGCTAGCAATGATAACGCAATYACCGATATTGCGATCTTCTCGTCYGCCACCGGTTTTGGTGGCATAGGAATCTTGGTAATGCTAGCCGGAAATTCACAAACAAGAATTGATAATTGTTACATGGATTACACAACAATTGTGATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGATTTTTCTTGGGGGATGCTAACATTGTTTTGAAATCAATTAAGGGACAAATATCAGGATTGAAGATAGTCAATAATATGTTCACTGGGAACCCTAACGCTAAAGTTCCAATTGTGGCATTAGATGGAGTGTTTGGTAACGTTGACCAGGTGGTCATTGATTTGAACAGTGTTGATGGAATGGGGTTGAGATCAACGGTTGGGAAGCAATCTGTGGCTGGGAATGGAACAAAATGGGTGGCTGATTTTTCAGGAATTTTGGTGTTAAAATTAAATAATATTACAACAAATAAGGCCTAA 1173 0.4263 MMKFLISFLPFFFLVVVQQEATCFNQHKELSHNIRNKLKDTSGARDSSDAIIKALEDAFSLESEAELLPGVKDLGGVLVDLQGGNYTISKPIKFPSSAAGNLVVQGGTLRASDAFPTDGHLVELWASSSQKLSKTASFDDLYNKKLQQPKGIYYEDITFRDILFDSGYHGGGIFVVDSARIRINNCFFLHFTTEGILVQGGHETYISSCFLGQHSTVGGDSGERQFSGTAIELASNDNAITDIAIFSSATGFGGIGILVMLAGNSQTRIDNCYMDYTTIVMEDPVQVHVTNGFFLGDANIVLKSIKGQISGLKIVNNMFTGNPNAKVPIVALDGVFGNVDQVVIDLNSVDGMGLRSTVGKQSVAGNGTKWVADFSGILVLKLNNITTNKA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1607 390 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 248 381 - -
Amo14g1607 390 PANTHER POLYGALACTURONASE QRT3 248 381 IPR039279 GO:0004650
Amo14g1607 390 PANTHER POLYGALACTURONASE QRT3 40 251 IPR039279 GO:0004650
Amo14g1607 390 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 40 251 - -
Amo14g1607 390 Gene3D - 40 390 IPR012334 -
Amo14g1607 390 SUPERFAMILY Pectin lyase-like 35 355 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1607 Amo-Chr14 29226135 29228257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1607 - - gmx:100802482 530.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1607 14 29226135 29228257 Amo04g0470 04 9564509 9566546 hybridization