Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0470 ATGATGAGATTTTTAATCTCATTCTTACCCTTTTTCTTCTTGGTGGTGGTACTACAAGAAGCCACTTGCTTCAATCAACACAAAGAACTTTCTCATAATATTAGAAACAAACTCAAGGACACGAGCGGAGCACGTGACAGCAGCGACGCAATTATAAAGGCATTGGAGGATGCATTCAGTTTGGAGAGTGAGGCGGAGCTGCTTCCGGGGGTTAAAGACCTTGGGGGTGTATTGGTMGACCTGCAAGGTGGGAACTACACAATTAGCAAGCCCATCAAATTCCCTTCTTCTGCTGCTGGCAATCTTGTGGTACAAGGAGGAACGTTGAGAGCCTCTGATGCATTTCCCACTGATCGCCATCTAGTTGAGTTATGGGCATCTAGTTCCCAAAAGCTCTCAAAAACAGCATCATTTGATGACTTGTACAACAGGAAACTTCAGCAACCTAAAGGGATTTACTACGAAGACATAACATTCCGGGACATTCTATTCGATTCGGGCTACCATGGAGGAGGAATTTTTGTAGTTGATTCCGCTAGGATCCGAATCAACAACTGTTTCTTCCTCCATTTCACTACAGAGGGAATCCTAGTCCAAGGTGGCCACGAAACTTACATATCTAGCTGCTTTCTTGGGCAACACTCAACCGTAGGKGGGGACTCCGGCGAGCGACAATTCTCGGGAACTGCGATTGAACTTGCTAGCAATGATAACGCAATRACCGATATTGCGATCTTCTCGTCRGCCACCGGTTTTGGTGGCATAGGAATCTTGGTAATGCTAGCCGGAAATTCACAAACAAGAATTGATAATTGTTACATGGATTACACAGCAATTGTGATGGAAGACCCTGTTCAAGTTCATGTCACTAATGGATTTTTCTTGGGGGATGCTAACATTGTTTTGAAATCAATTAAGGGACAAATATCAGGATTGAAGATAGTCAATAATATGTTCACTGGGAACCCTAACGCTAAAGTTCCAATTGTGGCATTAGATGGAGTGTTTGGTAACGTTGACCAGGTGGTCATTGATTTGAACAGTGTTGATGGAATGGGGTTGAGATCAACGGTTGGGAAGCAATCTGTGGCTGGGAATGGAACAAAATGGGTGGCTGATTTTTCAGGGGTTTTGGCTAAAATTAAATATATTGCAATAAACAAGGCCCGACTAATGTTCTGA 1182 0.4332 MMRFLISFLPFFFLVVVLQEATCFNQHKELSHNIRNKLKDTSGARDSSDAIIKALEDAFSLESEAELLPGVKDLGGVLVDLQGGNYTISKPIKFPSSAAGNLVVQGGTLRASDAFPTDRHLVELWASSSQKLSKTASFDDLYNRKLQQPKGIYYEDITFRDILFDSGYHGGGIFVVDSARIRINNCFFLHFTTEGILVQGGHETYISSCFLGQHSTVGGDSGERQFSGTAIELASNDNAXTDIAIFSSATGFGGIGILVMLAGNSQTRIDNCYMDYTAIVMEDPVQVHVTNGFFLGDANIVLKSIKGQISGLKIVNNMFTGNPNAKVPIVALDGVFGNVDQVVIDLNSVDGMGLRSTVGKQSVAGNGTKWVADFSGVLAKIKYIAINKARLMF* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0470 393 PANTHER POLYGALACTURONASE QRT3 40 379 IPR039279 GO:0004650
Amo04g0470 393 PANTHER POLYGALACTURONASE QRT3-LIKE PROTEIN 40 379 - -
Amo04g0470 393 Gene3D - 40 387 IPR012334 -
Amo04g0470 393 SUPERFAMILY Pectin lyase-like 35 353 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0470 Amo-Chr4 9564509 9566546 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0470 - - gmx:100802482 531.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1607 14 29226135 29228257 Amo04g0470 04 9564509 9566546 hybridization