Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1599 ATGAGTTCTTCCACCACTGCTTCCTTTCATAAATGTTTCAAGCCTAACCACCACCACCATCAACATCACGCGTTCACGTTCGCTTTTCTTCACTCTTGTTTCTTCTTCTTCTTTCTCTTGTCAGCTCCTCCTCCTGCATGCGCTTCAACGTTTTCTGGTAATGAAACTGGAGATTTAGAAAAACAAGGTGATTTGTTTCCACAGATTCTACGAGATGAGGCAGTGGGGAGACTCTATCAGCTTGGAAAGGTGAGTGATGGTAATGGCTATCTGGAGAGAACATTCTTGAGTCCTGCATCTATGAGAGCAATCAACGTTATCCGCGAGTGGATGGAGGACGCTGGTTTGAGAACTTGGGTGGACCAAATGGGAAATGTACACGGCCGAGTTGAAGGTGTGAATCCAAATGCCGAGGCCTTATTGATTGGATCTCACATGGATACTGTTGTGGATGCTGGCATGTTTGATGGATCACTAGGAATAGTATCAGCAATATCTGCACTAAAGGCTTTGAAAGTCAATGGAAAGCTGGAAAAGCTAAAGCGCCCTGTTGAGGTGATTGCATTTTGTGATGAAGAAGGAGTGAGGTTTCAAACTACTTTCTTGGGTAGTGGCGCTATAGCCGGCATTTTACCTGCTACAACATTGGAGATATCTGATAAGAGGGATGCTATGATAAAAGATGTTCTCAAGGAGAATTCTATAGAAATTACAGAGGAAAGTTTGTTACAGCTCAAGTATGATCCAAAATCTGTTTGGGGCTATGTTGAGATTCACATTGAGCAGGGCCCTGTGCTAGAACAGAAGGGTTTTCCACTTGGTGTGGTAAAAGGCATAGCTGGCCAGACCAGATTGAAGGTAACCAAAAGGAATTCCGCCTGGATTTTTGTCTCAAATCTGTTCACTAGAAGAGTATTACTCTCTCTGTACCTTTTATCTGGTATCTGTGAAAATTTGGTAAGTTCTCGGATCAGTGGATCAAATTTTCAGTGA 993 0.43 MSSSTTASFHKCFKPNHHHHQHHAFTFAFLHSCFFFFFLLSAPPPACASTFSGNETGDLEKQGDLFPQILRDEAVGRLYQLGKVSDGNGYLERTFLSPASMRAINVIREWMEDAGLRTWVDQMGNVHGRVEGVNPNAEALLIGSHMDTVVDAGMFDGSLGIVSAISALKALKVNGKLEKLKRPVEVIAFCDEEGVRFQTTFLGSGAIAGILPATTLEISDKRDAMIKDVLKENSIEITEESLLQLKYDPKSVWGYVEIHIEQGPVLEQKGFPLGVVKGIAGQTRLKVTKRNSAWIFVSNLFTRRVLLSLYLLSGICENLVSSRISGSNFQ* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1599 330 SUPERFAMILY Zn-dependent exopeptidases 66 289 - -
Amo14g1599 330 Gene3D Zn peptidases 64 305 - -
Amo14g1599 330 Pfam Peptidase family M20/M25/M40 141 284 IPR002933 GO:0016787
Amo14g1599 330 PANTHER ALLANTOATE DEIMINASE-RELATED 62 288 - -
Amo14g1599 330 ProSitePatterns ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 140 149 IPR001261 -
Amo14g1599 330 PANTHER ALLANTOATE DEIMINASE-RELATED 62 288 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1599 Amo-Chr14 29029658 29033806 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1599 K02083 - gmx:100819399 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1599 14 29029658 29033806 Amo04g0468 04 9248597 9253841 hybridization