Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1536 ATGGAGAAGACTCCATCACAAGAGCCAGCATTCCAGCACGGATCTCTGAGCATGGCTCCAACAAACAAGAACTACGAAGCACTTGAAATCGAATCCATCAACAACATTGAAGAAGAAGAAGAAACGGAATTAGAAATGGGCAACAAGAAAACACAAGAAGAATTGCATGCAACAACAGATCAAAAATCCATAAGAAATAAGAGGTACATGTCCCTTCTGGTTCTGAATTATTTTCTCCTCTTTGTGGGTTCGGTCTCTTCAAGCATGCTTTCAAAGTATTATTTCACCCACAAAGGTTCAAGCAAATGGGTTTCAACTTGGGTTCAGTGTACGGGATTTCCTCTCTTACTCATCCCCATTTTTCTCCCATATTCTCTCCTCAAATCCACCATCCGAAAACCCTTTACCGATTTCAACAAAAAGATTCTAACTTTATCGATCTTTGTTGGAATCATGCTGGGAATCAATAATCTTCTTTTTTCATGGGGGGTTTCGTATCTTCCAGTTTCAACCTCGTCGCTTCTTCTTTCTTCTCAACTTGGTTTTAATCTCATTCTCTCTGTCATCATTGTAAAGCAAAAGATAACCTTTTCGAATCTCAACACCGTGATTCTCATCACGCTGAGCTCCATCATTCTCGCATTGAATTCAAGCAAAGAAAGACCCAAAGGTGTAACGGAAAAGCAGTATTTCATCGGATTCTTTTGCACCATTAGTGCAGGTTTGTTGTTTGCTTTGTACCTTCCCATTGTAGAGAAGATCTACAAAAAGGGTTTACTGGGTTTTGATCGTGGCAACCATCTTGGCGTGGCAGTTTTGCTTTATGGGCACGGCGGGGATGGTTTTCTTGACATCAAGTTTGGTGGGTTGAAAGCTGTGGCCACTGTTTTATGTTTGTGGGGGTTTTGCTCTTATGTTTATGGCATGTATACTAAGATGTTGGAAGCTAAGGCTATTCCTCAGCAAAACAATAACAACAACAACCACCATTCTGCTGAAGATTCATCTTCCCTGGAGTTGGTTAGTATGGTGAGAAATCTTGGGGTTAGTCATTGA 1056 0.4081 MEKTPSQEPAFQHGSLSMAPTNKNYEALEIESINNIEEEEETELEMGNKKTQEELHATTDQKSIRNKRYMSLLVLNYFLLFVGSVSSSMLSKYYFTHKGSSKWVSTWVQCTGFPLLLIPIFLPYSLLKSTIRKPFTDFNKKILTLSIFVGIMLGINNLLFSWGVSYLPVSTSSLLLSSQLGFNLILSVIIVKQKITFSNLNTVILITLSSIILALNSSKERPKGVTEKQYFIGFFCTISAGLLFALYLPIVEKIYKKGLLGFDRGNHLGVAVLLYGHGGDGFLDIKFGGLKAVATVLCLWGFCSYVYGMYTKMLEAKAIPQQNNNNNNHHSAEDSSSLELVSMVRNLGVSH* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1536 351 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 286 323 - -
Amo14g1536 351 MobiDBLite consensus disorder prediction 1 20 - -
Amo14g1536 351 MobiDBLite consensus disorder prediction 39 59 - -
Amo14g1536 351 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 44 257 - -
Amo14g1536 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 135 219 - -
Amo14g1536 351 MobiDBLite consensus disorder prediction 43 59 - -
Amo14g1536 351 PANTHER OS09G0467300 PROTEIN-RELATED 286 323 IPR030182 GO:0015211|GO:0016021
Amo14g1536 351 PANTHER OS09G0467300 PROTEIN-RELATED 44 257 IPR030182 GO:0015211|GO:0016021
Amo14g1536 351 Pfam Purine nucleobase transmembrane transport 72 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1536 Amo-Chr14 27527531 27528805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1536 67 256 Organic Solute Cotransporters AT1G30840 64.737 1.01e-75 236
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1536 - - aip:110271453 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1536 14 27527531 27528805 Amo04g0407 04 7923736 7925016 hybridization