Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0407 ATGGAGAAGACTCCATCACAATCACAAGAGCCAGCATTCCAGCACGGATCTCTGAGCATGGCTCCAACGAACAAGAACTACGAAACACTTGAAATCGAATCTATCAATAACATTGAAGGAGAAGAAGAAGCAGAATCAGAAATGGGCAACAAGAAAGCACAAGAAGAGCTGCATGCAACAACAGATCAAAAATCCATAAGAAACAAGAGGTACATGCCCCTTCTGGTTTTGAATTACTTTCTCCTCTTTGTGGGTTCGGTCTCTTCAAGCATGCTCTCAAAGTATTATTTCACCCACAAAGGTTCAAGCAAATGGGTTTCAACTTGGGTTCAGTGTACGGGTTTTCCTCTCTTACTCATCCCCATTTTCCTCCCATATTCTCTCCTCAAATCCACCATCCGAAAACCCTTTACCGATTTCAACAAAAAGATTCTAACTTTATCGATTTTCGTTGGAATCATGCTGGGAATCAATAATCTTCTTTTCTCATGGGGGGTTTCGTATCTTCCAGTTTCAACCTCGTCGCTTCTTCTTTCTTCTCAGCTTGGTTTCAATCTCATTCTCTCCGTCATCATCGTGAAGCAAAAGATAACCTTTTCGAATCTCAACACCGTGATTCTCATCACGTTGAGCTCCATCATTCTCGCATTGAATTCGAGCAGCGAAAGACCCAAAGGTGTAACGGAAAAGCAGTACTTCATTGGATTCTTTTGCACCATTAGCGCGGGTTTGTTGTTTGCTTTGTACCTTCCCGTTGTGGAAAAGATCTACAAGAAGGGTTTACTGGGTTTTGATCGTGGCAACCATCTTGGCGTGGCAGTTTTGCTTTATGGGCACGGCGGGGATGGTTTTCTTGACATCAAGTTTGGTGGGTTGAAAGCTGTGGCCACTGTTTTATGTTTGTGGGGGTTTTGCTCTTATGTTTATGGCATGTATACTAAGATGTTGGAAGCTAAGGCTATTCCTCAGCAAAACAATAACAACAACAACCACCATTCTGCTGAAGATTCATCTTCCCTGGAGTTGGTTAGTATGGTGAGAAATCTTGGGGTTAGTCATTGA 1062 0.4256 MEKTPSQSQEPAFQHGSLSMAPTNKNYETLEIESINNIEGEEEAESEMGNKKAQEELHATTDQKSIRNKRYMPLLVLNYFLLFVGSVSSSMLSKYYFTHKGSSKWVSTWVQCTGFPLLLIPIFLPYSLLKSTIRKPFTDFNKKILTLSIFVGIMLGINNLLFSWGVSYLPVSTSSLLLSSQLGFNLILSVIIVKQKITFSNLNTVILITLSSIILALNSSSERPKGVTEKQYFIGFFCTISAGLLFALYLPVVEKIYKKGLLGFDRGNHLGVAVLLYGHGGDGFLDIKFGGLKAVATVLCLWGFCSYVYGMYTKMLEAKAIPQQNNNNNNHHSAEDSSSLELVSMVRNLGVSH* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0407 353 PANTHER OS09G0467300 PROTEIN-RELATED 288 325 IPR030182 GO:0015211|GO:0016021
Amo04g0407 353 MobiDBLite consensus disorder prediction 44 60 - -
Amo04g0407 353 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 46 259 - -
Amo04g0407 353 PANTHER TRIOSE-PHOSPHATE TRANSPORTER FAMILY PROTEIN 288 325 - -
Amo04g0407 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 137 220 - -
Amo04g0407 353 MobiDBLite consensus disorder prediction 1 33 - -
Amo04g0407 353 Pfam Purine nucleobase transmembrane transport 74 260 - -
Amo04g0407 353 PANTHER OS09G0467300 PROTEIN-RELATED 46 259 IPR030182 GO:0015211|GO:0016021
Amo04g0407 353 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0407 Amo-Chr4 7923736 7925016 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0407 69 258 Organic Solute Cotransporters AT1G30840 64.737 1.08e-74 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0407 - - aip:110271453 423.705
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1536 14 27527531 27528805 Amo04g0407 04 7923736 7925016 hybridization