Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1457 AGCTCTTGCTCACCAGTCACCACTCACTACGCCGAAGAAATTAACATGGCGGAACTCAATTTCTTTGTTGGGGTCATAGGGAACATCATCTCAATCCTCATGTTTCTTTCTCCTATGGATACATTTGTGAGAATAATAAAGAAGAAATCAACAGAAGATTTCTCAAGCATACCTTATATTTGCACATTGCTTAACTCCTCTCTATGGACTTATGCGATTGTGGCTGGGATATTGGATGTTGGGGTGTTGGGAGCAGCAATATTAACAAGCGAAATAGCATTGAAGGGAGAGGCTCGTACTAATGCAGTTGGTGTTATGGGTGCAGGCCTTAACATTCTTATGTATGCTTCACCTCTTGCTGCCATGAAAACAGTAGTGGCGACAAAGAGTGTAGAATATATGCCATTCTTTCTTTCGTTTTTCTTCTTTCTAAACGGTGGCGTTTGGTTGTTTTACGCTTTTCTTGTTCGCGATGTTATTCTTGGGGGATTGGAAGAAGGATCTCAATACAATGAGCATCTCATTTCTCATCCCCAACTTAGCTAA 546 0.4103 SSCSPVTTHYAEEINMAELNFFVGVIGNIISILMFLSPMDTFVRIIKKKSTEDFSSIPYICTLLNSSLWTYAIVAGILDVGVLGAAILTSEIALKGEARTNAVGVMGAGLNILMYASPLAAMKTVVATKSVEYMPFFLSFFFFLNGGVWLFYAFLVRDVILGGLEEGSQYNEHLISHPQLS* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1457 181 Gene3D - 24 94 - -
Amo14g1457 181 PANTHER RAG1-ACTIVATING PROTEIN 1 19 72 - -
Amo14g1457 181 PANTHER RAG1-ACTIVATING PROTEIN 1 73 162 - -
Amo14g1457 181 Pfam Sugar efflux transporter for intercellular exchange 102 160 IPR004316 GO:0016021
Amo14g1457 181 Pfam Sugar efflux transporter for intercellular exchange 22 71 IPR004316 GO:0016021
Amo14g1457 181 Gene3D - 98 162 - -
Amo14g1457 181 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 19 72 - -
Amo14g1457 181 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 73 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1457 Amo-Chr14 24760480 24764205 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1457 16 161 Miscellaneous Gene Families AT4G15920 45.745 1.14e-49 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1457 K15382 - gmx:100776607 202.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1457 14 24760480 24764205 Amo14g1457 14 24760480 24764205 ECH
Amo14g1457 14 24760480 24764205 Amo04g0335 04 5913798 5916907 hybridization