Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0335 AGCTCTCGCTCACCAGTCACCACTCACTACGCTGAAGAAACTAACATGGCGGAACTCAATTTCTTTGTTGGGGTCATAGGGAACATCATCTCAACCCTCATGTTTCTTTCTCCTATGGATACATTTGTGAGAATAATAAAGAAAAAATCAACGGAAGATTTCTCAAGCATGCCTTATATTTGCACATTGCTTAACTCCTCTCTATGGACTTATTTGATTTGGTATGTGTGTAATATATTTCAGATAAAGAGTGCGATTATGGCTGGGATATTGGATGTTGGGGTGTTGGGAGCAGCAATATTAACAAGTGAAATAGCATTGAAGGGAGAGGCTCGTACTAATGCAGTTGGTGTCATGGGTGCAGGCCTTAACATTCTTATGTATGCTTCACCTCTTGCTGCCATGAAAACAGTGGTGACGACAAAGAGTGTAGAATATATGCCATTCTTTCTTTCGTTTTTCTTCTTTCTAAACGGTGGCGTTTGGTTGTTTTACGCTTTTCTTGTTCGCGATGTTATTCTTGGGGGATTGGAAGAAGGATCTGAATACAATGAGCATCTCATTTCTCATCCCCAACTTAGCTAA 585 0.4034 SSRSPVTTHYAEETNMAELNFFVGVIGNIISTLMFLSPMDTFVRIIKKKSTEDFSSMPYICTLLNSSLWTYLIWYVCNIFQIKSAIMAGILDVGVLGAAILTSEIALKGEARTNAVGVMGAGLNILMYASPLAAMKTVVTTKSVEYMPFFLSFFFFLNGGVWLFYAFLVRDVILGGLEEGSEYNEHLISHPQLS* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0335 194 Gene3D - 21 104 - -
Amo04g0335 194 Gene3D - 112 175 - -
Amo04g0335 194 Pfam Sugar efflux transporter for intercellular exchange 115 173 IPR004316 GO:0016021
Amo04g0335 194 Pfam Sugar efflux transporter for intercellular exchange 22 71 IPR004316 GO:0016021
Amo04g0335 194 PANTHER RAG1-ACTIVATING PROTEIN 1 81 175 - -
Amo04g0335 194 PANTHER RAG1-ACTIVATING PROTEIN 1 19 72 - -
Amo04g0335 194 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 81 175 - -
Amo04g0335 194 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 19 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0335 Amo-Chr4 5913798 5916907 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0335 16 174 Miscellaneous Gene Families AT4G15920 46.809 5.76e-53 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0335 K15382 - cit:102609435 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1457 14 24760480 24764205 Amo04g0335 04 5913798 5916907 hybridization