Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1404 CAGGTGGCCGACCTTCCTTTACACAGAAAGAGTAAAAAAAAGAAAAACAAAAAAACAAAAAACACCACATTCTCTGTTCCTCTCTGGTCTCTGCAAAAGCATTCAGATTTCATACCCAAAATTCCCAAAGTTTCGTTCTTTTTCTTTCCTTTTCGAAATCCCAATTTTCAATTTTACGGGGAAATCTCACTTCCGCTTGCATTTCATTCGTTCTTTTGCCGCCGTGACTCGGTTCTTGAGGCGGTTTCCATGGCGGCGGGGACGATGGCGACGGCAGCCGGAGCGGCGGTGATGCTGTACTATGTCCTCAGCCGGAGGCTAGGGCGGAAGGATTCGGAGGAGGATCTCGACGGCGGCGGCGATCCGTCGAAGTCAGGTAGATCGGTTCGCCGGAGGAGGATCTCACGGCGGCCAGCTCAGCCTCCGGCGACGCTGCTCGAATCGATCGTGACGCTGTCGGAGACGCTGAGGTTCACTTACTCCGAGACGCTCGGCAAATGGCCAATCGGCGACTTGGCCTTCGGCATCAACTACTTCATGCGCAAGCAGGGTAATTTGCCAGTGGCTAGTGTTTATGCTGGGAGTGAGTGTGTGCAACTGAAAGGGGATGATATCATTGTGGAGCTTTATGAGCTGTTGKGGTTGTTGACACTTTGCATGCTTTTCTCTAAGAAGCCATTTCCTGTGTTCTTAGATTCTGCTGGATTCTCCCCTGATGATGTGCTCATACAYATGCCCAAAGCTGGGCTTTTGAGGCCTGCTTTTACAATTATACGAGATACACAGTCAAAATGCTTACTTCTATTGATACGGGGCACTCATAGCATAAAAGACACGCTGACAGCTGCAACCGGTGCTGTGGTCCCATTCCACCATTCTGTTTTAAATGATGGCGGGATAAGCAACTTAGTTTTAGGATATGCACACTGCGGTATGGTTGCTGCTGCTCGTTGGATTGCAAAGCTCTGCACTCCTACCCTACTCAAGGCTCTTGGTGAAAGTCCAGACTTCAAAGTCAAGATTGTTGGACACTCTCTTGGGGGTGGTACTGCTGCACTGTTAACGTATATTCTTAGAGAACAGAAGGAGTTCTCTACAAGCACTTGTGTCACGTTTGCTCCAGCTGCCTGTATGACATGGGAGTTAGCAGAATCAGGAAAGAACTTCATCACTACTATCATCAATGGTTCTGATTTAGTGCCCACGTTCTCGACTGCATCTATTGATGATCTCCGTTCTGAGGTCACCGCGTCCTCATGGATAAATGATTTACGGGATCAGGTTGAACATACAAGGGTCCTGAATGTTGTCTACCGCTCTGCAACTGCACTTGGATCTCACRTACCGTCTATATCTAGCGCAAAGGCGCGGGTAGCTGGGGCAGGCGCAATTCTGTGGCCAGTAACCAGCGGCACTCAGGTTGTGATGAAGCGGGCACAAAGTGTTGCTGAAGCTGTAGTCAGAACTCGTTCATCATTATCATCATGGTCTTGCATGAGTGCGCGTCGCCGGAATGTTAGTTCATCTCCCAACAGCAAAACAGAAGACTTAAGCGAAGCGTCTCTGATATCCGAAACAGCTACTGAATCTCTTTTGACCGAAGAGATGGTAACAGAATCAACKCTTAAGGATGAACACAYTTCRTCATCAAGTGGAGGATCCGGCCACGATGATACGGATGAAGAGGAACAACTACTTGCTGCCAAACAAGACATTTCTGATTCCACTGCAGATCACATAACAGAAGGCCAGTTGTGGTATGAACTAGAGAAGGAGCTTCAGAAACAGGAGAATTCCATSGACATTGATGTTCAGGAAGAAGAGGCCGCGGCAGRGAAAGAGATAACTGAGGAAGAGAATCAGCTTGTTGATGCTGCGGAAGGAAGCAATTCGATCACAACATCTGAAAATGTTGATAGCCACCGGTTTTATCCCCCGGGGAGGATCATGCACATTGTCTGCATGCCTTCCCCGGTTGAATCAAATTCCGATGATCCTGTCGAGGAACATGTGGGCTTATTCGAAACACCTAGAGAGCTTTACAGCAAGCTTAGACTTTCAAGAACGATGATAAATGATCATTATATGCCAATGTATAAGAAGATGATGGAACTATTAATTCGAGAATTAGAGAAAGATARCACTGGTGACGTTATAATGTGA 2163 0.472 QVADLPLHRKSKKKKNKKTKNTTFSVPLWSLQKHSDFIPKIPKVSFFFFPFRNPNFQFYGEISLPLAFHSFFCRRDSVLEAVSMAAGTMATAAGAAVMLYYVLSRRLGRKDSEEDLDGGGDPSKSGRSVRRRRISRRPAQPPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLPVASVYAGSECVQLKGDDIIVELYELLXLLTLCMLFSKKPFPVFLDSAGFSPDDVLIHMPKAGLLRPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGESPDFKVKIVGHSLGGGTAALLTYILREQKEFSTSTCVTFAPAACMTWELAESGKNFITTIINGSDLVPTFSTASIDDLRSEVTASSWINDLRDQVEHTRVLNVVYRSATALGSHXPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVSSSPNSKTEDLSEASLISETATESLLTEEMVTESTLKDEHXSSSSGGSGHDDTDEEEQLLAAKQDISDSTADHITEGQLWYELEKELQKQENSXDIDVQEEEAAAXKEITEEENQLVDAAEGSNSITTSENVDSHRFYPPGRIMHIVCMPSPVESNSDDPVEEHVGLFETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDXTGDVIM* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1404 720 MobiDBLite consensus disorder prediction 112 134 - -
Amo14g1404 720 Pfam Lipase (class 3) 268 405 IPR002921 GO:0006629
Amo14g1404 720 SUPERFAMILY alpha/beta-Hydrolases 228 405 IPR029058 -
Amo14g1404 720 MobiDBLite consensus disorder prediction 112 128 - -
Amo14g1404 720 MobiDBLite consensus disorder prediction 504 577 - -
Amo14g1404 720 CDD Lipase_3 224 410 - -
Amo14g1404 720 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 84 713 - -
Amo14g1404 720 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 84 713 - -
Amo14g1404 720 Pfam Lipase 3 N-terminal region 133 200 IPR005592 GO:0016042
Amo14g1404 720 Gene3D alpha/beta hydrolase 235 441 IPR029058 -
Amo14g1404 720 MobiDBLite consensus disorder prediction 504 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1404 Amo-Chr14 23811773 23816415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1404 84 713 Acyl Lipid Metabolism Gene Families AT4G16070 64.662 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1404 - - gmx:100782138 1013.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1404 14 23811773 23816415 Amo14g1404 14 23811773 23816415 ECH
Amo14g1404 14 23811773 23816415 Amo04g0280 04 4732089 4736727 hybridization