Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0280 ATGGCGGCGGGGACGATGGCGACGGCAGCCGGAGCGGCGGTGATGCTGTACTATGTCCTCAGCCGGAGGCTAGGGCGGAAGGATTCGGAGGAGGATCTCGACGGCGGCGGCGATCCGTCGAAGTCAGGTAGATCGGTTCGCCGGAGGAGGATCTCACGGCGGCCAGCTCAGCCTCCGGCGACACTGCTCGAATCGATCGTGACGCTGTCGGAGACGCTGAGGTTCACTTACTCCGAGACGCTCGGCAAATGGCCAATCGGCGACTTGGCCTTCGGCATCAACTACTTCATGCGTAAGCAGGGTAATTTGCCAGTGGCTAGTGTTTATGCTGGGAGTGAGTCTGTGCAACTGAAAGGGGATGATATCATTGTGGAGCTTTATGAGCTGTTGAGGTTGTTGACACTTTGCATGCTTTTCTCTAAGAAGCCATTTCCTGTGTTCTTAGATTCTGCTGGATTCTCCCCTGATGATGTGCTCATACAAATGCCCAAAGCTGGGCTTTTGAGGCCTGCTTTTACAATTATACGAGATACACAGTCAAAATGCTTACTTCTATTGATACGGGGCACTCATAGCATAAAAGACACGCTGACAGCTGCAACCGGTGCTGTGGTCCCATTCCACCATTCTGTTTTAAATGATGGCGGGATAAGCAACTTAGTTTTAGGATATGCACACTGCGGTATGGTTGCTGCAGCTCGTTGGATTGCAAAGCTCTGCACTCCTACCCTACTCCAGGCTCTTGGTGAAAGTCCAGAATTCAAAGTCAAGATTGTTGGACACTCACTTGGGGGTGGTACTGCCGCACTGTTAACGTATATTCTTAGAGAACAGAAGGAGTTCTCTACAAGCACTTGTGTCACGTTTGCTCCAGCTGCCTGTATGACATGGGAGTTAGCAGAATCAGGAAAGAACTTCATCACTACTATCATCAATGGTTCTGATTTAGTGCCCACGTTCTCGACTGCATCTATTGATGATCTCCGTTCTGAGGTCACCGCGTCCTCATGGATAAATGATTTACGGGATCAGGTTGAACATACAAGGGTCCTGAATGTTGTCTACCGCTCTGCAACTGCACTTGGATCTCACRTACCGTCTATATCTAGCGCAAAGGCGAGGGTAGCTGGGGCAGGCGCAATTCTGTGGCCAGTAACCAGCGGCACTCAGGTTGTGATGAAGCGGGCACAAAGTGTTGCTGAAGCTGTAGTCAGAACTCGTTCATCATTATCATCATGGTCTTGCATGAGTGCACGTCGCCGGAATGTTAGTTCATCTCCCAACAGCAAAACAGAAGACTCGAGCGAAGCGTCTCTGATATCCGAAACAACTACTGAATCTCTTTTGACCGAAGAGATGGTAACAGAATCAACKCTTAAGGATGAACACAYTTCRTCATCAAGTGGAGGATCCGGCCACGATGATACGGATGAAGAGGAACAACTACTTGCTGCCAAACAAGACATTTCTGATTCCACTGCAGATCACATAACAGAAGGCCAGTTGTGGTATGAACTAGAGAAGGAGCTTCAGAAACAGGAGAATTCCATWGACATTGATGTTCAGGAAGAAGAGGCCGCGGCAGRGAAAGAGATAACTGAGGAAGAGAATCAGCTTGTTGATGCTGCGGAAGGAAGCAATTCGATCACAACATCTGAAAATGTTGATAGCCACCGGTTTTATCCCCCGGGGAGGATCATGCACATTGTCTGCATGCCTTCCCCGGTTGAATCAAATTCCGATGATCCTGTCGAGGAACATGTGGGCTTATTCGAAACACCTAGAGAGCTTTACAGCAAGCTTAGACTTTCAAGAACGATGATAAATGATCATTATATGCCAATGTATAAGAAGATGATGGAACTATTAATTCGAGAATTAGAGAAAGATARCACTGGTGACGTTATAATGTGA 1914 0.4801 MAAGTMATAAGAAVMLYYVLSRRLGRKDSEEDLDGGGDPSKSGRSVRRRRISRRPAQPPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLPVASVYAGSESVQLKGDDIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSPDDVLIQMPKAGLLRPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLQALGESPEFKVKIVGHSLGGGTAALLTYILREQKEFSTSTCVTFAPAACMTWELAESGKNFITTIINGSDLVPTFSTASIDDLRSEVTASSWINDLRDQVEHTRVLNVVYRSATALGSHXPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVSSSPNSKTEDSSEASLISETTTESLLTEEMVTESTLKDEHXSSSSGGSGHDDTDEEEQLLAAKQDISDSTADHITEGQLWYELEKELQKQENSIDIDVQEEEAAAXKEITEEENQLVDAAEGSNSITTSENVDSHRFYPPGRIMHIVCMPSPVESNSDDPVEEHVGLFETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDXTGDVIM* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0280 637 MobiDBLite consensus disorder prediction 28 54 - -
Amo04g0280 637 Pfam Lipase 3 N-terminal region 50 118 IPR005592 GO:0016042
Amo04g0280 637 MobiDBLite consensus disorder prediction 421 471 - -
Amo04g0280 637 Pfam Lipase (class 3) 185 322 IPR002921 GO:0006629
Amo04g0280 637 Gene3D alpha/beta hydrolase 151 358 IPR029058 -
Amo04g0280 637 MobiDBLite consensus disorder prediction 421 494 - -
Amo04g0280 637 SUPERFAMILY alpha/beta-Hydrolases 145 322 IPR029058 -
Amo04g0280 637 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 1 630 - -
Amo04g0280 637 PANTHER LIPASE CLASS 3 FAMILY PROTEIN 1 630 - -
Amo04g0280 637 MobiDBLite consensus disorder prediction 28 45 - -
Amo04g0280 637 CDD Lipase_3 141 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0280 Amo-Chr4 4732089 4736727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0280 1 630 Acyl Lipid Metabolism Gene Families AT4G16070 65.861 0.0 753
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0280 - - gmx:100782138 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1404 14 23811773 23816415 Amo04g0280 04 4732089 4736727 hybridization