Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1382 ATGGTTGTATATACTGACAATGATGAGTACACATCTCCAATCTCTCCAACGAGGTTGTTCAAGGCCTTGGTGGTTGATTCTCACAACCTCATTCCAAAACTCCTGCCACAGGCTGTCGCCGGGATCCAGCTCATTCACGGCGACGGCGGCACTGGAAGCATAAGGCAGATTAACTTTCTTGAAGGTGGGGAAGTGAAAAGTGTTAAGAACAGGGTTGATGAGATAAACGAGGAGACGTTAACTTACAGTTACACTGCAATAGAAGGTGATGCATTGAAGGACAAGTTTGCATCAATTGCTTATGAGGCTAAGTTTGAGGCAGCACCAAATGGTGGCAGCATTAATAAGATGACAACAAAGTATTATACTAAAGGTGATGTTGAGATCACTCAAGACGAAATTAAGATTGGGAAGGAGAGGGTGTTGGCCATTTACAAAGTTGTGGAAGCATATCTTCTTCAAAATCCTCATGTTTATGCTTGA 483 0.4286 MVVYTDNDEYTSPISPTRLFKALVVDSHNLIPKLLPQAVAGIQLIHGDGGTGSIRQINFLEGGEVKSVKNRVDEINEETLTYSYTAIEGDALKDKFASIAYEAKFEAAPNGGSINKMTTKYYTKGDVEITQDEIKIGKERVLAIYKVVEAYLLQNPHVYA* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1382 160 CDD Bet_v1-like 8 152 - -
Amo14g1382 160 SUPERFAMILY Bet v1-like 8 159 - -
Amo14g1382 160 Gene3D - 1 160 IPR023393 -
Amo14g1382 160 PANTHER MAJOR ALLERGEN PRU AR 1-LIKE 1 160 - -
Amo14g1382 160 Pfam Pathogenesis-related protein Bet v 1 family 5 155 IPR000916 GO:0006952
Amo14g1382 160 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1382 160 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1382 160 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1382 160 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1382 160 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1382 160 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1382 160 PRINTS Major pollen allergen Bet V1 signature 144 154 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo14g1382 160 PANTHER - 1 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1382 Amo-Chr14 23069128 23070205 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1382 - - adu:107483508 318.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1382 14 23069128 23070205 Amo14g1382 14 23069128 23070205 ECH
Amo14g1382 14 23069128 23070205 Amo04g0273 04 4479998 4480294 hybridization