Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0273 ATGAATGCAGGTTCTGAAACCAAACACTTGAAGCATAGAATTGATGCAATAGACAAAGAGAATCTCACATACAGCTACAGTGTGATTGAGGGGGACAAGGCTGAATCAGTGTCATATGACATAAAATTTGAGCCTACTCCTGAAGGTGGTTGCAAGTCCAAGAGTGTGAGCAAGTTTTATCCCAAACAAGGTGTTGAGATCAAAGAGGAAGATATCAAGGCTTCTAAAGAGGAATCTTTGGCTGTCTTTAAGGTTGTTGAAGCCTATCTTGTTGCTAACCCCGAGGCATATGCTTGA 297 0.4141 MNAGSETKHLKHRIDAIDKENLTYSYSVIEGDKAESVSYDIKFEPTPEGGCKSKSVSKFYPKQGVEIKEEDIKASKEESLAVFKVVEAYLVANPEAYA* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0273 98 CDD Bet_v1-like 4 90 - -
Amo04g0273 98 Pfam Pathogenesis-related protein Bet v 1 family 3 92 IPR000916 GO:0006952
Amo04g0273 98 SUPERFAMILY Bet v1-like 3 97 - -
Amo04g0273 98 PANTHER - 3 98 - -
Amo04g0273 98 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 3 98 - -
Amo04g0273 98 PRINTS Major pollen allergen Bet V1 signature 27 40 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo04g0273 98 PRINTS Major pollen allergen Bet V1 signature 8 27 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo04g0273 98 PRINTS Major pollen allergen Bet V1 signature 82 92 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Amo04g0273 98 Gene3D - 1 96 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0273 Amo-Chr4 4479998 4480294 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0273 - - pvu:PHAVU_009G252400g 140.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1382 14 23069128 23070205 Amo04g0273 04 4479998 4480294 hybridization