LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo14g1378	ATGGGTGTTCACACTTTTGAAGAGGAGTCAACCTCACCGGTGCCTCCAGCAAAACTATTCAAAGCCACCGTGATAGACGGCGATGAACTCACCACAAAGCTGATTCCTGCAATCCAGAATATTGAAATCGTTGAAGGAAGCGGAGGCCCTGGAACTGTCAAGAAGGTTACCGCTGTTGAAGATGGGAAAACTAGTTATGTGCTACACAAGATTGATGCAATTGATGAGGCTACCTATACATATGACTACACAATATCCGGAGGAACAGGGTTCCAAGAGATCTTAGAGAAAGTTTCATTCAAGACAAAGCTCGAGGCTGCTGATGGTGGATCCAAAATCAAGGTCTCTGTTACATTCCACACCAAGGGTGATGCTCCTCTCCCTGATGAAGTTCATCAAGATGTCAAGAAAAAGAGCCAAGGAATCTTCAAGGCTATTGAGGGTTATGTTTTGTCCAACTAG	462	0.4459	MGVHTFEEESTSPVPPAKLFKATVIDGDELTTKLIPAIQNIEIVEGSGGPGTVKKVTAVEDGKTSYVLHKIDAIDEATYTYDYTISGGTGFQEILEKVSFKTKLEAADGGSKIKVSVTFHTKGDAPLPDEVHQDVKKKSQGIFKAIEGYVLSN*	154

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo14g1378	153	Gene3D	-	2	153	IPR023393	-
	Amo14g1378	153	SUPERFAMILY	Bet v1-like	2	153	-	-
	Amo14g1378	153	PRINTS	Major pollen allergen Bet V1 signature	3	23	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	PRINTS	Major pollen allergen Bet V1 signature	26	36	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	PRINTS	Major pollen allergen Bet V1 signature	49	58	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	PRINTS	Major pollen allergen Bet V1 signature	65	84	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	PRINTS	Major pollen allergen Bet V1 signature	84	97	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	PRINTS	Major pollen allergen Bet V1 signature	108	124	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	PRINTS	Major pollen allergen Bet V1 signature	142	152	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	Pfam	Pathogenesis-related protein Bet v 1 family	1	153	IPR000916	GO:0006952
	Amo14g1378	153	ProSitePatterns	Pathogenesis-related proteins Bet v I family signature.	88	119	IPR024949	GO:0004864\|GO:0009738\|GO:0010427\|GO:0038023
	Amo14g1378	153	PANTHER	-	1	153	-	-
	Amo14g1378	153	CDD	Bet_v1-like	5	150	-	-
	Amo14g1378	153	PANTHER	ABA-RESPONSIVE PROTEIN	1	153	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo14g1378	Amo-Chr14	22983142	22985483	Dispersed/Proximal

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo14g1378	-		-	gmx:100305867	176.407

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Amo14g1378	14	22983142	22985483	Amo04g0269	04	4456680	4459221	hybridization