Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo14g1348 ATGGCAATGTCTTCGTTCTCATGCGCTGCTACTGTTCTTCTACTGCTTCTACTCACAATTGACCTTCGCATGGCAGATGCTCAAATTGGTGTTTGCTATGGTATGCTGGGGAACAATCTACCAGCAGCGAACGAAGTGATAGATGTTTACAGATCAAACAACATCAAACGAATGAGACTCTATGATCCCAATCAAGCTGCTCTACAAGCACTTAGAAACTCCGGGATTGAACTCATTCTTGGAGTTCCAAACTCTGATCTTCAAGGCCTTGCCACAAACTCTGAAAGCGCACGCCAATGGGTGCAAAGAAATGTGCTAAGCTTTTGGCCAAGTGTCAAAATCAAGTACATTGCAGTTGGTAATGAAGTGAGACCTGTTGGAGACTCCACTTCATGGATGGCTCAGTATGTTCTCCCAGCAATTCAGAATGTATACCAAGCTATTAGAGCTCAAGGCCTCCATGATCAAATCAAGGTTTCAACTGCCATTGACATGTCCCTCTTAGGAAACTCTTTTCCTCCTTCACAAGGCTCATTTAGGGGTGACGTCAGGTCATACCTAGACCCAATTATTGGGTATTTGGTATATGCAGGTGCACCATTACTAACCAACGTTTATCCTTACTTTAGCTATAAAGATAACCCACGTGACATATCACTATCCTATGCTATTTTCACATCACCAAATGTTGTGGTACAAGATGGTCAATATGGGTACCAGAATCTTTTTGATGCTATGTTAGATGCAGTGCATGCTGCCATTGATAACACTGGAATTGGTTTTGTTGAGGTTGTTGTGTCTGAGAGCGGGTGGCCCTCAAGTGGAGATTTTGGTGCAACTTATGATAGTGCCCAGATTTATTTGGATAATTTGATTCGTCATGTTAATAGGGGTACTCCAAGAAGGTCTTGGAAGCCTACGGAAACTTATTTATTTGCCATGTTTGATGAGAACCAGAAGAATCCAGAGCTAGAAAAACATTTTGGACTTTTCTTTCCTAACAAACAGAAGAAGTATTCATTTGGATTTGGTGCAGAAAGGGGATTGGAATTCTTTAATGCAACAATTCCATTGAAGAGTGACATCTGA 1089 0.416 MAMSSFSCAATVLLLLLLTIDLRMADAQIGVCYGMLGNNLPAANEVIDVYRSNNIKRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNSESARQWVQRNVLSFWPSVKIKYIAVGNEVRPVGDSTSWMAQYVLPAIQNVYQAIRAQGLHDQIKVSTAIDMSLLGNSFPPSQGSFRGDVRSYLDPIIGYLVYAGAPLLTNVYPYFSYKDNPRDISLSYAIFTSPNVVVQDGQYGYQNLFDAMLDAVHAAIDNTGIGFVEVVVSESGWPSSGDFGATYDSAQIYLDNLIRHVNRGTPRRSWKPTETYLFAMFDENQKNPELEKHFGLFFPNKQKKYSFGFGAERGLEFFNATIPLKSDI* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo14g1348 362 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 348 IPR044965 GO:0004553|GO:0005975
Amo14g1348 362 Gene3D Glycosidases 28 344 - -
Amo14g1348 362 SUPERFAMILY (Trans)glycosidases 29 342 IPR017853 -
Amo14g1348 362 Pfam Glycosyl hydrolases family 17 29 342 IPR000490 GO:0004553|GO:0005975
Amo14g1348 362 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Amo14g1348 362 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 18 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo14g1348 Amo-Chr14 22186552 22191209 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo14g1348 35 347 Glycoside Hydrolase AT4G16260 62.540 5.78e-142 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo14g1348 - - ccaj:109791097 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1348 14 22186552 22191209 Amo04g0021 04 273285 275159 hybridization