Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g0021 ATGTTGGGCAACAATCTACCAGCAGCAAAGGAAGTGATAGATGTTTACAGATCAAACAACATCAAACGAATGAGACTCTATGATCCCAATCAAGCTGCTCTACAAGCACTTAGAAACTCCGGCATTGAACTCATTCTTGGAGTTCCAAACTCTGACCTTCAAGGGCTTGCCACAAACTCTAACAGCGCACGCCAATGGGTGCAAAGAAATGTGCTAAGCTTTTGGCCTAGTGTCAAAATCAAGTACATTGCAGTTGGTAATGAAGTGAGACCTGTTGGAGACTCCATTTCATGGATAGCTCAGTATGTTCTCCCAGCAATTCAGAATGTATACCAAGTTATTAGAGCTCAAGGCCTTCATGATCAAATCAAGGTTTCAACTGCCATTGACATGTCCCTCTTAGGAAACTCTTTTCCTCTTTCACAAGCCTCATTTAGGGCTGACGTCAGGTCATACCTGGACCCAATTATAGGGTATTTGGTATATGCAGGTCGGTAA 498 0.4297 MLGNNLPAAKEVIDVYRSNNIKRMRLYDPNQAALQALRNSGIELILGVPNSDLQGLATNSNSARQWVQRNVLSFWPSVKIKYIAVGNEVRPVGDSISWIAQYVLPAIQNVYQVIRAQGLHDQIKVSTAIDMSLLGNSFPLSQASFRADVRSYLDPIIGYLVYAGR* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g0021 165 Gene3D Glycosidases 1 165 - -
Amo04g0021 165 Pfam Glycosyl hydrolases family 17 1 160 IPR000490 GO:0004553|GO:0005975
Amo04g0021 165 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE B 1 160 - -
Amo04g0021 165 SUPERFAMILY (Trans)glycosidases 2 162 IPR017853 -
Amo04g0021 165 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 1 160 IPR044965 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g0021 Amo-Chr4 273285 275159 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g0021 1 161 Glycoside Hydrolase AT4G16260 60.248 1.59e-64 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g0021 - - ccaj:109791097 282.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo14g1348 14 22186552 22191209 Amo04g0021 04 273285 275159 hybridization