Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g5643 ATGGTTACAAAAGGGAACCCGGGAGACAACAGAAACAATAAGGGTCCTATGCCTGTTTTCACGGTAGTTGGCTTGTGTGCTTTCTTCTATATATTAGGCGTATGGCAGCGGAGTGGTTTTGGAAAGGGAGACAGCATAGCGGTGGCAATTAACAGAGAAACGGATTGCAGTGTTCTGAGTGATCTTAGCTATGAATCCCATCGCGATGGTGAAGCTGGAGCGCCTGATGCTCCCGAAGGAGGAGTCAAGGAGTTCAAGCCATGTGATGATCAATACATTGATTATACTCCTTGTCATGATCAAAGACGAGCAATGACATTCCCCCGCGAAAATATGATGTATAGAGAAAGGCATTGTCCTCCTCAAGAAGAAAAACTTTATTGTCTCATACCAGCTCCTAGAGGATATGCAACCCCATTTCCATGGCCCAAGAGCCGTGATTATGTTCCCTATGCGAATGCCCCTTACAAGAGCTTGACAGTGGAGAAGGCTGTGCAAAACTGGATACAATATGAAGGAAATGTTTTCAGGTTTCCTGGTGGAGGCACACAGTTTCCCCAAGGAGCTGATGCTTATATTGATGAACTAGCATCTGTTATTCCACTCGACAATGGCATGGTTAGAACTGCTTTAGATACTGGTTGTGGGGTTGCTAGTTGGGGGGCATACCTGTTTAAGAAAAATGTTGTTACAATGTCAATTGCACCAAGGGACTCTCATGAAGCACAAGTGCAATTTGCTTTAGAAAGAGGTGTTCCGGCTATCATTGGCGTTCTTGGAACCATCATGTTGCCTTTCCCTTCTGGATCATTTGACATGGCACATTGTTCTCGCTGTTTGATTCCATGGGGTGGAAATGATGGTATATATATGAAGGAGGTTGATCGAGTTCTCAGACCTGGTGGTTACTGGATCCTTTCTGGCCCTCCAATCAGCTGGAGGAATAGCTACCGAGCATGGCAGCGTCCTGAAGATGAGCTTGAGGAGGAGCAAAAGCAGATTGAGGATATTGCTAAACTTCTTTGTTGGGAAAAGAGACATGAGAAGGGTGAAATCGCTATATGGAGAAAAAGATTAAATACCGATGAATGCACTGAACAAGAAGCTCAATCTTCAACATGTGATGCTACAAATGCCAGTGATGTCTGGTACAAAAAGATGGAAAATTGTATAACTCCTACTAAAACTAATGGTTCGTGGAAGCCATTCCCAGAGAGACTCAATGCTATTCCTTCCAGAATAACAAGTGGATCTGTTCCTGGTCTATCTGTAGAGATATTTGTGGATGATAATCGATCATGGAAGAAGCATGTAAACGCTTATAAGCGGGTCAACAAAATCATTGACTCGGGAAGGTATCGCAACATAATGGACATGAATGCTGGTCTGGGGAGTTTTGCTGCTGCCATGGACTCTCCGAAATTATGGGTTATGAATGTTGTGCCTACAATCGCAGAGAAAGCTAACCTTGGTGTTATATTTGAGCGTGGATTGATTGGCATTTATCACGATTGGTGCGAAGCCTTCTCCACATATCCCAGGACCTATGACCTAATCCATGCAAATGCTGTTTTCAGCTTATACAAGAATGAGTGCGGCGCAGAAGACATTTTATTGGAGATGGATCGTATATTACGGCCTGAAGGAGCTGTAATAATTCGAGATGATGTTGGCGTGCTAATGCGGGTGAAGAGAATTGTGAGAGGAATGAGGTGGAAAACGAGAATGGTGGATAATGAGGATGGTCCATTGGTTTCAGAGAAGGTTTTGTTTGCAGTCAAGCAGTATTGGGTTGCAGGTGACAACAGTACAAGTTCACTGTGA 1824 0.4391 MVTKGNPGDNRNNKGPMPVFTVVGLCAFFYILGVWQRSGFGKGDSIAVAINRETDCSVLSDLSYESHRDGEAGAPDAPEGGVKEFKPCDDQYIDYTPCHDQRRAMTFPRENMMYRERHCPPQEEKLYCLIPAPRGYATPFPWPKSRDYVPYANAPYKSLTVEKAVQNWIQYEGNVFRFPGGGTQFPQGADAYIDELASVIPLDNGMVRTALDTGCGVASWGAYLFKKNVVTMSIAPRDSHEAQVQFALERGVPAIIGVLGTIMLPFPSGSFDMAHCSRCLIPWGGNDGIYMKEVDRVLRPGGYWILSGPPISWRNSYRAWQRPEDELEEEQKQIEDIAKLLCWEKRHEKGEIAIWRKRLNTDECTEQEAQSSTCDATNASDVWYKKMENCITPTKTNGSWKPFPERLNAIPSRITSGSVPGLSVEIFVDDNRSWKKHVNAYKRVNKIIDSGRYRNIMDMNAGLGSFAAAMDSPKLWVMNVVPTIAEKANLGVIFERGLIGIYHDWCEAFSTYPRTYDLIHANAVFSLYKNECGAEDILLEMDRILRPEGAVIIRDDVGVLMRVKRIVRGMRWKTRMVDNEDGPLVSEKVLFAVKQYWVAGDNSTSSL* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g5643 607 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 13 602 IPR004159 GO:0008168
Amo13g5643 607 Gene3D Vaccinia Virus protein VP39 162 386 IPR029063 -
Amo13g5643 607 PANTHER METHYLTRANSFERASE PMT2-RELATED 13 602 - -
Amo13g5643 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 440 559 IPR029063 -
Amo13g5643 607 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 94 594 IPR004159 GO:0008168
Amo13g5643 607 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 328 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g5643 Amo-Chr13 158296643 158300841 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g5643 - - gmx:100807547 1075.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2226 11 122132570 122134823 Amo13g5643 13 158296643 158300841 ECH
Amo13g5643 13 158296643 158300841 Amo13g5643 13 158296643 158300841 ECH