Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo11g2226 ATGTTAACAAAGGGCAAAGTACAAGGAGGAGACACCATTAAAAAGAATTGTTCATTAACTTCAGTTTTGATTGTAGTTGGATTGTGCGGTTTCTTCTACGTAGTTGGTTTATGGCAACGAAGCGGTTTTGGAAAGGGAGATAGAATAGCCATTGGAGTTATCAAAAGAACAGAGTGCATTACTCTCTCTGATCTCATGTATGACACTCCCAACAATCACAATGATGGTGATCATATCAAGGAATACAACTACAAGCCGTGTGATGCAAGCTTCATCGATCACACGCCGTGTCACCGTCGCAGCGGCGAAAGAACACGGTTTCCTCAAGAACTTGATGCATACATTGATGAACTTTCATCTGTTATACCCTTCCACACGGGAATGATTAGAACTGCATTGGATACTGAGTGTAGGGTTGCTAGTTTTGGTGCATACATGTTTAAGAAAAATGTAATTACTATGTCAATTGGAGGACATGAATCTCAAGTGCAATACGCAATGGAAAGAGGTGTTCCTGCTATCATTGGCGTTCTTGCAACCATGAAGCTGCCTTTCCCTTCAGGATCTTTTGACATGGCACATTGTTCTCACTGTCTCATTCCATGGGACACAGAAGATGGAATGTACATGATGGAGGTTGACCGAGTTCTCAGGCCTGGTGGTTACTGGATACTTTCCGGTCCACCTATCAATTGGAAGAATAACTACCAAGAATGGCAGCGTTCCCAACTGGAACTTGAGAAGGAGCAAAGGAACATTGAAGATATTGCCAAACTTCTTTGCTGGGAAAAGAAATATGAAAAGGGTGACATTGCCATATGGAGAAAAAGATTAAATTGCAGCCAACAAGACACTCCACCCACGGCGGCAGCAGTATGCAAATCCACCCATGCTGATCATGTCTGGTACAAGAAGATGGAAAAGTGTGTAACTCCTAGCCCCGGACCAAGCCGTTCATGGAAACCATTCCCAGAGAGGCTCAACGCCATTCCATCAAGAGTAAGCAGAGAATATGTGGAGGTATACAAGGAGGACAGCCGATTGTGGAAGAAGCATGTAAATGCTTACAAGAGGGTCAACAAAATCATTGACTCAGGAAGGTATCGCAACATCATGGACATGAATGCTGGTCTGGGAAGTTTTGCTGCAGCTCTAGATTCAACCAAATTGTGGGTTATGAATGTTGTGCCTACCATTTCTCAAAAAGCTTCTCTTGATGTTATCTTGGAGCGTGGATTGATCGGCATTTATCATGATTGGTGTGAAGCATTTTCCACATATCCAAGAACATATGATCTGATCCACGCAAATGGTGTTTTCAGTTTGTACAAGAATGTATGTAGTGCAGAAGAGATGCTACTGGAGATGGACCGGATTCTGCGGCCGGAAGGAGCAGTGATATTGAGAGATGAAGAGAATGTGTTGAGGAAGGTTCAGAGAATAGTGAGGGGAATGAGATGGAAGACCAAAATGGTGGATCACGAGGATGGTCCACTTGAGCAAGAGAAGCTTTTGTTTGCTGTCAAGCAGTATTGGGTTGAAGGTGACACCAACATCACCACCACATGA 1569 0.4347 MLTKGKVQGGDTIKKNCSLTSVLIVVGLCGFFYVVGLWQRSGFGKGDRIAIGVIKRTECITLSDLMYDTPNNHNDGDHIKEYNYKPCDASFIDHTPCHRRSGERTRFPQELDAYIDELSSVIPFHTGMIRTALDTECRVASFGAYMFKKNVITMSIGGHESQVQYAMERGVPAIIGVLATMKLPFPSGSFDMAHCSHCLIPWDTEDGMYMMEVDRVLRPGGYWILSGPPINWKNNYQEWQRSQLELEKEQRNIEDIAKLLCWEKKYEKGDIAIWRKRLNCSQQDTPPTAAAVCKSTHADHVWYKKMEKCVTPSPGPSRSWKPFPERLNAIPSRVSREYVEVYKEDSRLWKKHVNAYKRVNKIIDSGRYRNIMDMNAGLGSFAAALDSTKLWVMNVVPTISQKASLDVILERGLIGIYHDWCEAFSTYPRTYDLIHANGVFSLYKNVCSAEEMLLEMDRILRPEGAVILRDEENVLRKVQRIVRGMRWKTKMVDHEDGPLEQEKLLFAVKQYWVEGDTNITTT* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo11g2226 522 Gene3D Vaccinia Virus protein VP39 325 510 IPR029063 -
Amo11g2226 522 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 14 100 IPR004159 GO:0008168
Amo11g2226 522 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 101 516 IPR004159 GO:0008168
Amo11g2226 522 Gene3D Vaccinia Virus protein VP39 140 276 IPR029063 -
Amo11g2226 522 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 102 509 IPR004159 GO:0008168
Amo11g2226 522 PANTHER METHYLTRANSFERASE PMT2-RELATED 14 100 - -
Amo11g2226 522 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 247 IPR029063 -
Amo11g2226 522 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 339 504 IPR029063 -
Amo11g2226 522 PANTHER METHYLTRANSFERASE PMT2-RELATED 101 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo11g2226 Amo-Chr11 122132570 122134823 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo11g2226 - - ahf:112710313 1068.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo11g2226 11 122132570 122134823 Amo13g5643 13 158296643 158300841 ECH
Amo11g2226 11 122132570 122134823 Amo11g2226 11 122132570 122134823 ECH