Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3400 ATGAAGAAAATGGTACTGAAATTGGATTTGTACGATGATAAAGCCAAGCAGAAGGCAATGAAAATGGTTTCTAGCCTTTCAGGCATTGACTCAATCGCCATGGATATGAAGGAGAGGAAGCTAACTGTAGTGGGTGACATAGACCCCGTTCAAGTGGTGAGCAAGCTCAGAAAAACTTGGCACACAGAAATCTTAACTGTGGGGCCAGCAAAAGAGCCTGAGAATAAGAAAGAGGAGGGTAAAAAAGATGATGACAACAAAAATAATAAGAAGAAAGAAGATGACAAGAATAAGAAGAAAGATATAAATGAACAAACTGCTGAGTTTGTCAAGCTCTATAGAGGATATAACCCTTATATGACCACAAACTATTATGTTCCTTCTGCTGAAGAAAACCCAAATGCTTGTGCTATATGTTAG 420 0.3833 MKKMVLKLDLYDDKAKQKAMKMVSSLSGIDSIAMDMKERKLTVVGDIDPVQVVSKLRKTWHTEILTVGPAKEPENKKEEGKKDDDNKNNKKKEDDKNKKKDINEQTAEFVKLYRGYNPYMTTNYYVPSAEENPNACAIC* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3400 139 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 139 - -
Amo13g3400 139 Pfam Heavy-metal-associated domain 9 61 IPR006121 GO:0046872
Amo13g3400 139 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 139 - -
Amo13g3400 139 MobiDBLite consensus disorder prediction 67 104 - -
Amo13g3400 139 MobiDBLite consensus disorder prediction 70 104 - -
Amo13g3400 139 Gene3D - 1 72 - -
Amo13g3400 139 SUPERFAMILY HMA, heavy metal-associated domain 2 59 IPR036163 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3400 Amo-Chr13 113247658 113249245 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3400 - - aprc:113855312 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3400 13 113247658 113249245 Amo13g3400 13 113247658 113249245 ECH
Amo13g3400 13 113247658 113249245 Amo03g2407 03 102795490 102797102 hybridization