Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2407 ATGAAGAAAATGGTACTGAAATTGGATTTGCACGATGATAAAGCCAAGCAGAAGGCAATGAAAATGGTTTCTAGCCTTTCAGGCATTGACTTAATCGCCATGGATATGAAAGAGAGGAAGCTAACTGTAGTGGGTGACATAGACCCCGTTCAAGTGGTGAGCAAGCTCAGAAAAGCTTGGCACACAGAAATCTTAACTGTGGGGCCAGCAAAAGAGCCTGAGAAGAAGAAAGAGGAGGGTAAAAAAGATGATGACAACAATAATAAGAAGAAAGAAGATGACAAGAATAAGAAGAAAGATCTAAACGAACAAACTGCTGAGTTTGTCAAGCACTATAGAGGATATAACCCTTATATGACCACAAACTATTATGTTCCTTTTGCTGAAGAAAACCCAAATGCTTGTGCTATATGTTAG 417 0.3909 MKKMVLKLDLHDDKAKQKAMKMVSSLSGIDLIAMDMKERKLTVVGDIDPVQVVSKLRKAWHTEILTVGPAKEPEKKKEEGKKDDDNNNKKKEDDKNKKKDLNEQTAEFVKHYRGYNPYMTTNYYVPFAEENPNACAIC* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2407 138 MobiDBLite consensus disorder prediction 68 105 - -
Amo03g2407 138 SUPERFAMILY HMA, heavy metal-associated domain 1 60 IPR036163 GO:0046872
Amo03g2407 138 Gene3D - 1 72 - -
Amo03g2407 138 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 1 138 - -
Amo03g2407 138 MobiDBLite consensus disorder prediction 64 105 - -
Amo03g2407 138 Pfam Heavy-metal-associated domain 9 61 IPR006121 GO:0046872
Amo03g2407 138 PANTHER HEAVY METAL-ASSOCIATED DOMAIN PROTEIN 1 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2407 Amo-Chr3 102795490 102797102 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2407 - - aprc:113855312 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3400 13 113247658 113249245 Amo03g2407 03 102795490 102797102 hybridization