Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3319 ATGCATAGTCGTAGCCTTAGCCGCTCATCAAGGGAATCATTCAGGTTCTTTGGGAGCCCTGACAAAGATGAAGACCTTAGAAAGACCAAAACAGAGATTGAGAACAATATCACAAAACTGCTTAAGCTTGTCAAGAACGATGATCAAAGCAAAAAGAATAGGAATCCACGGCTTGTTAGAAAAGAGGCAGAACTTGTGGGGCTAATTGAGGACTTAAACAGCCAGTATCAATCACTCTTTCAACTGTGTGATTATTTGAACAGAGAGTTTATGAGAGCGATTTCTCGTAGAAGAAGCCGAAGGGGTACCGGCTCTAACACAGACTCAGAGTCAGAATACTTCTCCTCAGAGGAACTAGAAAACTATACCAAGTTTTCATTAGATGATGTTCTCAAGAATGATGATGCAAAGGAATATGAGGAGCAGTTGAATTCACAGATGAAAGAGATGGAGAGCCTGAGCCAGCAGAAGACGAATCTAGAAAATCAAATTGAAAGCCAATCGCTCCAATTCGAAGAGCTAAGCGCAAATAATACCAGGCTGTATGATCGGGTCTTGGATCTGGAATCGTTGTTGAAAGAGGAAAAAGGTGTGGTATCTGTTTTGGAGGAAAAACTGAAAATCAATGAGAATCAAGCTGAGTCCAACATTGAAGCATTGATGACACAGGTCAACAAGCTCAATCTGGAGTTAAAGACACTGCGTACACAGAAAGATCAAACGGAAGAGGAAATAAAAGGTAACAAAGATAAAGCATTAACTCAAATGAAGGACTTGATGGACAAGCTCAATTCCATGCAGGAGGAGTTGGACTCTGTAAGCACACAGAACAAAGAATTAGATGCTCAGGTCAGAAATGACAGGGAGCAGATACTCCGATACCTGATTCAGATTGAAAACCTGAACCAAGATTTGGCGGAGACAAGTTTGGATAAGCAAAGTTTAATGGACGACAAAGAGCAATTCCTGGCAAGAATAAAGGACTTGGAATTTGAATTGGAAGCAGAAAGCATGCAGAAGAATGCACTGGAAGCTCAGTTAAGAGACAGGGATTATGATATGATGCTTGTGGAGGAAGAAAACAGGACTCTGCAGGACAGAAACAGTGAACTGAAGAAAGCAATGCACCAAAGTGGCGAAGAGATAACCGCACTTATGAGGGTACCGGAGACCCAGAAGGACGCGGCTTCTATGGAGGCCATGGCCCTAAAGGCAGAAATGAATATTATGAGATTAGAGATGGACAATCTGTATGCACAGAGAAGCAAGTTGGAGCAGCAAATTGAGCGAAACCGGAAGGAATATGAAGAAAATTTGGGAAACTTGAGCAGCAAGTTATCGAGCCAAATAGCAGAACGCGAGAAAACGATAGAGGAACAAGCAGCAACCATTCAGAGAATAAACGAGGAGCATAAACAGACCAAAGTTGCGTTGAATAAGAACAAGCTGTCCCGCCAAACGGCCGAAAGGAAAATGATTGAGCTGGCAACGGAGTTCCGGAGGAAAATGGAAGACAACATCCGGCTTCTGCACCAGAGGATCCACGTCGCGGAACAGATGAACAACGAGAACAAAAACAATTTCAAGATCGTCAATCAGAGGTACCACGAAGAGAACAAGATGCTCCAAGAGAAAATCGCAAGCTACGAAGAAGAGCTGAAGGTGCCAAAGTTTGATATTGCGCCCTTGGGTGGGGAACAACACGCTTTGGTTTTTGAAGCTCTAAATGAATTAGAAATGGTCACTATGAACCGTTTGGACTCAATAGTTGGGGACGTAGAGGAACAGAAGAAACACGTGGTGAGCCGCGTGTTTAAAATGATTGGAGAGGTTCAGTACGGTAAAGAATGGATTAAGAAAAGAAACCGTGAATGGGAAGAAACGAAGAACAATGCGGAGTGTCTGAGGGCACTGCTGGACAGCAAGGAGGAGCAGGAGTTCTTGCTGAGGGAGAAGGTGTGGAAGTTGGAGGCCAAGGTGAGTAAAGAAGCTGGGGAGAAACTCAACTTGATGAATGCGGTGAGCCAGTTAGAGAAGAAAGTCGCAAGGTTCGAGAACGCTTTGAAGGAGAAGGAGGAAGATTTGGTTAGCCTTGGTGAGAAGAAGAGGGAAGCAATAAAGCAACTTTGTTTTGTTGTTGAGTTTCATAGAGAACGTTGTAGAGATCTCAAAGATTTGGTCATCAAGATGGGGGCCAACAACAACACTAACACCAAGAAATAA 2223 0.4336 MHSRSLSRSSRESFRFFGSPDKDEDLRKTKTEIENNITKLLKLVKNDDQSKKNRNPRLVRKEAELVGLIEDLNSQYQSLFQLCDYLNREFMRAISRRRSRRGTGSNTDSESEYFSSEELENYTKFSLDDVLKNDDAKEYEEQLNSQMKEMESLSQQKTNLENQIESQSLQFEELSANNTRLYDRVLDLESLLKEEKGVVSVLEEKLKINENQAESNIEALMTQVNKLNLELKTLRTQKDQTEEEIKGNKDKALTQMKDLMDKLNSMQEELDSVSTQNKELDAQVRNDREQILRYLIQIENLNQDLAETSLDKQSLMDDKEQFLARIKDLEFELEAESMQKNALEAQLRDRDYDMMLVEEENRTLQDRNSELKKAMHQSGEEITALMRVPETQKDAASMEAMALKAEMNIMRLEMDNLYAQRSKLEQQIERNRKEYEENLGNLSSKLSSQIAEREKTIEEQAATIQRINEEHKQTKVALNKNKLSRQTAERKMIELATEFRRKMEDNIRLLHQRIHVAEQMNNENKNNFKIVNQRYHEENKMLQEKIASYEEELKVPKFDIAPLGGEQHALVFEALNELEMVTMNRLDSIVGDVEEQKKHVVSRVFKMIGEVQYGKEWIKKRNREWEETKNNAECLRALLDSKEEQEFLLREKVWKLEAKVSKEAGEKLNLMNAVSQLEKKVARFENALKEKEEDLVSLGEKKREAIKQLCFVVEFHRERCRDLKDLVIKMGANNNTNTKK* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3319 740 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 28 733 - -
Amo13g3319 740 Coils Coil 400 470 - -
Amo13g3319 740 Coils Coil 532 552 - -
Amo13g3319 740 Coils Coil 667 708 - -
Amo13g3319 740 Coils Coil 133 177 - -
Amo13g3319 740 MobiDBLite consensus disorder prediction 96 115 - -
Amo13g3319 740 Coils Coil 625 645 - -
Amo13g3319 740 Coils Coil 203 346 - -
Amo13g3319 740 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 9 90 IPR011684 GO:0003779
Amo13g3319 740 Coils Coil 354 377 - -
Amo13g3319 740 PANTHER COP1-INTERACTIVE PROTEIN 1 28 733 - -
Amo13g3319 740 Pfam KIP1-like protein 20 84 IPR011684 GO:0003779
Amo13g3319 740 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3319 Amo-Chr13 106508882 106513692 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3319 - - adu:107479793 1345.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3319 13 106508882 106513692 Amo13g3319 13 106508882 106513692 ECH
Amo13g3319 13 106508882 106513692 Amo03g2322 03 97336135 97338475 hybridization