Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2322 ATGGTCCCAACCCAAGTGAAAAACAAAAAAATGCATAGTCGTAGCCTTAGCCGCTCATCAAGGGAATCATTCAGGTTCTTTGGGAGCCCTGACAAAGATGAAGACCTTAGAAAGACCAAAACAGAGATTGAGAACAATATCACAAAACTGCTTAAGCTTGTCAAGAACGATGATCAAAGCAAAAAGAATAGGAATCCACGGCTTGTTAGAAAAGAGGCAGAACTTGTGGGGCTAATTGAGGACTTAAACAGCCAGTATCAATCACTCTTTCAATTGTGTGATTATTTGAACAGAGAGTTTATGAGAGCGATTTCTCGCAGAAGAAGCCGAAGGGGTACCGGCTCTAACACAGACTCAGAGTCAGAGTACTTCTCCTCAGAGGAACTAGAAAACTATACCAAGTTTTCATTAGATGATGTTCTCAAGAATGATGATGCAAAGGAATATGAGGAGCAGTTGAATTCACAGATGAAAGAGATGGAGAGCCTGAGCCAGCAGAAGACGAATCTAGAAAATCAAATTGAAAGCCAATCGCTCCAATTCGAAGAGCTAAGCGCAAATAATACCAGGCTGCATGATCGGGTCTTGGATCTGGAATCGTTGTTGAAAGAGGAAAAAGGTGTGGTGTCTGTTTGGGAGGAAAAACTGAAAATCAATGAGAATCAAGCCAAGTCCAACATTGAAGCATTGATGACACAGGTCAACAAGCTCAATCTGGAGTTAAAGACACTGCGTACACAGAAAGATCAAACGGAAGAGGAAATAGAAGGTATCAAAGATAAAGCATTAGCTCAAATGAAGGACTTGATGGACAAGCTCAATTCCATGCAGGAAGAGTTGGACTCTGTAAACACACAGAACAAAGAATTAGATGCTCAGGTCAGAAATGACAGGGAGCTGATACTCCGATACCTGATTCAGATTGAAAACCTGAGCCAAGATTTGGCGGAGACAAGTTTGGATAAGCAGAGTTTAATGGACGACAAAGAGCAATTCCTGGCAAGAATAAAGGACTTGGAATTTGAATTGGAAGCAGAAAGCATGCAGAAGAATGCACTGGAAGCTCAGTTAAGAGACAGGAATTATGATATGAAGCTTGTGGAGGAAGAAAACAGGACTCTGCAGGACAGAAACAGTGAACTGAAGAAAGCAATGCACCAAAGTGGCGAAGAGATAACCGCACTTATGAGGGTACCGGAGACCCAGAAGGACGCGGCTTCTATGGAGGCCATGGCCCTAAAGGCAGAAATGAATATTATGAGATTAGAGATGGACAATCTGTATGCACAGAGAAGCAAGTTGGAGCAGCAAATTGAGCGAAACCGGAAGGAATATGAAGAAAATTTGGGAAACTTGAGCAGCAAGTTATCGAGCCAAATAGTAGAACGCGAGAAAACCATAGAGGAACAAGCAGCAACCATTCAGAGAATAAACGAGGAGCATAAACAGACCAAAGTTGCGTTGAATAAGAACAAGCTGTCCCGCCAAACGGCCGAAAGGAAAATGATTGAGCTGGCAACGGAGTTCCGGAGGAAAATGGAAGACAACATCCGGCTTCTGCACCAGAGGATCCACGTGGCCGAACAGATGAACAACGAGAACAAAAACAATTTCAAGATCGTCAATCAGAGGTACCACGAAGAGAACAAGACGCTCCAAGAGAAAATCGCAATTTACGAAGAAGAGCTGAAGGTGCCAAAGTTTGATATTGCGCCCTTGGGTGGGGAACAACACGCTTTGGTTTTTGAAGCTCTAAATGAATTAGAAATGGTCACTATGAACCGTTTGGACTCAATAGTTGGGGACGTTGAGGAACAGAAGAAACACGTCGTGAGCCGCGTGTTTAAAATGATTGGAGAGGTTCAGTACGGTAAAGAATGGATTAAGAAAAGAAACCGTGAATGGGAAGAAACGAAGAACAATGCGGAGTGTCTGAGGGCACTGCTGGACAGCAAGGAGGAGCAGGAGTTCTTGCTGAGGGAGAAGGTGTGGAAGTTGGAGGCCAAGGTGAGTAAAGAAGCTGGGGAGAAACTTAACTTGATGAATGCGGTGAGCCAGTTAGAGAAGAAAGTGGCAAGGTTGGAGAACGCTTTGAAGGAGAAGGAGGAAGATTTGGTTAGCCTTGGTGAGAAGAAGAGGGAAGCAATAAAGCAACTTTGTTTTGTTGTTGAGTTTCATAGAGAACGTTGTAGGGATCTCAAAGATTTGGTCATCAAGATGGGGGCCAACAACAACACTAACACCAAGAAATAA 2253 0.4341 MVPTQVKNKKMHSRSLSRSSRESFRFFGSPDKDEDLRKTKTEIENNITKLLKLVKNDDQSKKNRNPRLVRKEAELVGLIEDLNSQYQSLFQLCDYLNREFMRAISRRRSRRGTGSNTDSESEYFSSEELENYTKFSLDDVLKNDDAKEYEEQLNSQMKEMESLSQQKTNLENQIESQSLQFEELSANNTRLHDRVLDLESLLKEEKGVVSVWEEKLKINENQAKSNIEALMTQVNKLNLELKTLRTQKDQTEEEIEGIKDKALAQMKDLMDKLNSMQEELDSVNTQNKELDAQVRNDRELILRYLIQIENLSQDLAETSLDKQSLMDDKEQFLARIKDLEFELEAESMQKNALEAQLRDRNYDMKLVEEENRTLQDRNSELKKAMHQSGEEITALMRVPETQKDAASMEAMALKAEMNIMRLEMDNLYAQRSKLEQQIERNRKEYEENLGNLSSKLSSQIVEREKTIEEQAATIQRINEEHKQTKVALNKNKLSRQTAERKMIELATEFRRKMEDNIRLLHQRIHVAEQMNNENKNNFKIVNQRYHEENKTLQEKIAIYEEELKVPKFDIAPLGGEQHALVFEALNELEMVTMNRLDSIVGDVEEQKKHVVSRVFKMIGEVQYGKEWIKKRNREWEETKNNAECLRALLDSKEEQEFLLREKVWKLEAKVSKEAGEKLNLMNAVSQLEKKVARLENALKEKEEDLVSLGEKKREAIKQLCFVVEFHRERCRDLKDLVIKMGANNNTNTKK* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2322 750 MobiDBLite consensus disorder prediction 1 35 - -
Amo03g2322 750 Coils Coil 308 356 - -
Amo03g2322 750 Coils Coil 364 387 - -
Amo03g2322 750 MobiDBLite consensus disorder prediction 15 35 - -
Amo03g2322 750 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 19 100 IPR011684 GO:0003779
Amo03g2322 750 Coils Coil 410 455 - -
Amo03g2322 750 PANTHER COP1-INTERACTIVE PROTEIN 1 38 743 - -
Amo03g2322 750 Coils Coil 677 718 - -
Amo03g2322 750 Coils Coil 143 187 - -
Amo03g2322 750 Coils Coil 542 562 - -
Amo03g2322 750 Coils Coil 213 293 - -
Amo03g2322 750 MobiDBLite consensus disorder prediction 106 125 - -
Amo03g2322 750 Coils Coil 635 655 - -
Amo03g2322 750 Coils Coil 460 480 - -
Amo03g2322 750 Pfam KIP1-like protein 30 94 IPR011684 GO:0003779
Amo03g2322 750 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 38 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2322 Amo-Chr3 97336135 97338475 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2322 - - adu:107479793 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3319 13 106508882 106513692 Amo03g2322 03 97336135 97338475 hybridization