Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3047 ATGGACTGGTTCTCCTGGCTATCCAGGACAAGTCTTGAGCCATCTCTCGTCTACGAATACGGCCTAGCATTTGCGCGAAACGAGCTTCAGTTGGAAGATGCAACCCACTTCAACCATGAGCTCCTCCAGAGCATGGGGATTTTGGTCGCCAAACATCGGCTCGAAATTCTCAAGCTCGCAAAGAAGGAGGATGGTAGTAGTGGCGCTGCCACGGCACTTACCAAGACTCTCTCCGGCGCAATCAAGAGATGCCTAAAGAGGTGCCTGAGTAAATTACAGGTGTTCAATGAACAAGAAGCAGAGGAGACAAAGGAAATGGTAACACCGGAGCCAAACTGGTACCATGGGAGGTGCAGAGGGTCAATGATGAGGAAGCATATTGACGGAGAGAAGGGTATGCAACGAAGCAGGACCATAGCACTGTCAGGGCCATTGGATGGAAGAACAATGCATAACAAAATGGTAACTGGGAAGGTGTTGAAGTTGTCTGGTCCTCTTGATGGGAAGATGAATGAGAGAATGATGTATGCAAATAGGAGTCCAATAATGGCTCATAGGCCTTTGGTTGAAGGGAGGTTCTTGGGCACACTAAAGAGTCCTAGACTTTCTAGTACTGGTCCTATTGATGGAAAAGCTATGGTTGATAATAGGAGTCCAAGGCTAAGTAGGCCTCTTGATGAAAGGGTTGATAGCCCAATGGGTTATAGTCCGTACAATAAGGCTAAAGGCGACTCTGATTGTGATGATGATTATGGACTGTGGCCTACAATGTTTGAGGATCTGAAACCCACTTGA 795 0.473 MDWFSWLSRTSLEPSLVYEYGLAFARNELQLEDATHFNHELLQSMGILVAKHRLEILKLAKKEDGSSGAATALTKTLSGAIKRCLKRCLSKLQVFNEQEAEETKEMVTPEPNWYHGRCRGSMMRKHIDGEKGMQRSRTIALSGPLDGRTMHNKMVTGKVLKLSGPLDGKMNERMMYANRSPIMAHRPLVEGRFLGTLKSPRLSSTGPIDGKAMVDNRSPRLSRPLDERVDSPMGYSPYNKAKGDSDCDDDYGLWPTMFEDLKPT* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3047 264 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 1 264 - -
Amo13g3047 264 SUPERFAMILY SAM/Pointed domain 5 61 IPR013761 -
Amo13g3047 264 MobiDBLite consensus disorder prediction 200 242 - -
Amo13g3047 264 CDD SAM_superfamily 2 62 - -
Amo13g3047 264 Gene3D - 1 69 IPR013761 -
Amo13g3047 264 PANTHER OSJNBA0033G05.11 PROTEIN 1 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3047 Amo-Chr13 82741083 82742771 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3047 - - lang:109328139 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3047 13 82741083 82742771 Amo03g2250 03 92031259 92032833 hybridization
Amo01g3183 01 103743855 103745030 Amo13g3047 13 82741083 82742771 PCT
Amo13g3047 13 82741083 82742771 Amo01g3183 01 103743855 103745030 PCT