Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g3183 ATGGACTGGTTCTCCTGGCTTTCAAGAACAACCCTTCATCCTTCTCTCATCTACGACTATGGCCTCACTTTCGCCCGCAACGAGCTCCAATTGGAAGACGCCACTCACTTCAACCACGAGCTCCTCCAGAGCATGGGAATCTCCATTGCCAAGCACAGGCTCGAGATTCTCAAGCTAGTTAACAAACAACAACAAGACCTCCCACCACCACCGCCGCCGCCGCCGCCGCCGCTCCGTCCCAACAAGAAGCTCTCCGCCGTCCTCAAGAGATGCCTCAGGAAGTGCATGAACAAGCTTGTGATTCACGGCCACGATGTCAACCTCAAGAACATGCCTCAACCACCGCCGCAAATAGAGCCGAATTGGCAGCACCAAGGGAAATGGAAAGGTATGGTGATGAGGAAACAAGCCATTGAGGAGAAGGAAGAGAAGGAAAAGGCAGCACTGCCGGTGCCTCCGATTTACCGAAGCAAAACCATAGCGCTATCAGGGCCGTTGGATGGAAGAATGCATGAGAAAGTGGCGCCTGCTAACAAGGCCATCAAGCTATCTGGACCATTGGATGGAAGGATGCACGACCGGATGATGGTGTACACTAATAGAAGCCCTTTGAGATCTTCGTCTGCGATTAGGCCTGTGCTGGATAGCAGGCTCACAAGAGGCCCAAGATTGTCTGGACCTCTTGATGCAAGGCTCATGGCTGAGAATAGAAGCCCAAGAATGCCAATACTTAGAAACTCCGATGCAAGTAGGCTCGTTGAGCCCGATGAGAGCCCATTGGGCTTCAGTCCCGGTGACAAGCTTGATTTTGACTTTGACGTTGATGATGATGTTGATGATCATACTCTCTGGCCTACACTGTTTCAAGATCTGAAACCAACTTGA 885 0.5153 MDWFSWLSRTTLHPSLIYDYGLTFARNELQLEDATHFNHELLQSMGISIAKHRLEILKLVNKQQQDLPPPPPPPPPPLRPNKKLSAVLKRCLRKCMNKLVIHGHDVNLKNMPQPPPQIEPNWQHQGKWKGMVMRKQAIEEKEEKEKAALPVPPIYRSKTIALSGPLDGRMHEKVAPANKAIKLSGPLDGRMHDRMMVYTNRSPLRSSSAIRPVLDSRLTRGPRLSGPLDARLMAENRSPRMPILRNSDASRLVEPDESPLGFSPGDKLDFDFDVDDDVDDHTLWPTLFQDLKPT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g3183 294 PANTHER STERILE ALPHA MOTIF (SAM) DOMAIN PROTEIN 1 294 - -
Amo01g3183 294 CDD SAM_superfamily 2 62 - -
Amo01g3183 294 SUPERFAMILY SAM/Pointed domain 6 70 IPR013761 -
Amo01g3183 294 PANTHER OSJNBA0033G05.11 PROTEIN 1 294 - -
Amo01g3183 294 MobiDBLite consensus disorder prediction 63 82 - -
Amo01g3183 294 MobiDBLite consensus disorder prediction 65 81 - -
Amo01g3183 294 Gene3D - 1 67 IPR013761 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g3183 Amo-Chr1 103743855 103745030 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g3183 - - gmx:100775936 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo01g3183 01 103743855 103745030 Amo13g3047 13 82741083 82742771 PCT
Amo01g3183 01 103743855 103745030 Amo03g2250 03 92031259 92032833 PCT
Amo13g3047 13 82741083 82742771 Amo01g3183 01 103743855 103745030 PCT
Amo03g2250 03 92031259 92032833 Amo01g3183 01 103743855 103745030 PCT