Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2750 ATGGGTTCGGAGGACAAAGGGTTGGGGTTCTTTAAGGAGATCGGTTTGGCTTCCAACAATATTGGCTCTTACATTAACGGCCAATGGAAGGCCAACGGTTCTTCAACCACTTCTCTTAATCCTTCTAACAATCAGGCTATTGCTCAAGTGACCGAACCAACTTTGCAAGATTATGAGGAGGGATTGAATGCTTGCAATGAAGCAGCTAAAATATGGATGACAGTTCCAGCGCCTAAGAGAGGTGAGATTGTAAGACAGATTGGTGAAGCATTAAGGGCTAAGTTGGAGCCTCTTGGTAAATTGGTGTCTCTTGAGATGGGAAAAATTCTTCCCGAAGGAATCGGGGAGGTTCAGGAAATTATCGACATGTGTGATTATGCTGTTGGGCTAAGCAGGCAATTGAATGGACAAATTATACCATCAGAACGTCCGGACCACATGATGCTTGAGACATGGAACCCACTGGGAATAGTTGGCGTGATAACTGCTTTCAACTTTCCATGTGCTGTTCTAGGGTGGAATGCTTGCATTGCATTAGTCTGTGGTAACTGTGTTGTCTGGAAGGGCGCTCCAACAACTCCATTGATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAAGAACAACTTGCCTGGTGCAATATTCACCTCTTTCTGTGGAGGTGCGGAAATTGGTCAGGCAATAGCAAAAGACACACGCATTCCCCTGGTCTCATTTACTGGAAGTACAAAGGTCGGCTTGACGGTCCAGAAAATAGTTAATGAAAGATTTGGCAAATGCCTGCTTGAGCTAAGTGGTAACAATGCAATTATAGTCATGGATGATGCAGACATCAAACTTGCTGTGCGCTCTATTCTGTTTGCTGCTGTAGGAACTGCTGGTCAGCGTTGCACAACATGCCGTAGACTGGTATTGAATTTGTGCATGAGAGTATTTACAAAAGATGTACTAGATCAACTTGTTGAAGTCTACAAACAAGTAAAAATTGGGGACCCCCTCGAGAAAGGGACTCTAGTTGGCCCCTTGCATACTCGTTCTTCAGTGGAAAACTTCAAGAATGGTATTTCAGCCATAAAATCACAGGGAGGGAAGATCTTAACAGGTGGGTCCATAGTAGATTCGGAAGGAAATTTTGTACAACCGACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAGGAATTGTTTGGTCCAGTACTATATGTTATGAAATTTCAGACTCTAGAAGAAGCAATTATCTTGAACAATTCTGTTCCTCAAGGGCTGAGTAGTTCAATCTTCACAAGACGACCTGAAGCTATATTCAAGTGGATTGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGTAAACATACCGACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGGGAAAAGGCYACCGGCGGTGGTCGTGAAGCAGGAAGTGACTCTTGGAAGCAATACATGCGCCGTTCTACATGTACCATCAATTATGGAAGTGAACTCCCATTAGCTCAGGGAATAAACTTTGGCTAG 1536 0.4375 MGSEDKGLGFFKEIGLASNNIGSYINGQWKANGSSTTSLNPSNNQAIAQVTEPTLQDYEEGLNACNEAAKIWMTVPAPKRGEIVRQIGEALRAKLEPLGKLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNGQIIPSERPDHMMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGAEIGQAIAKDTRIPLVSFTGSTKVGLTVQKIVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLVLNLCMRVFTKDVLDQLVEVYKQVKIGDPLEKGTLVGPLHTRSSVENFKNGISAIKSQGGKILTGGSIVDSEGNFVQPTIVEISPDAPVVKEELFGPVLYVMKFQTLEEAIILNNSVPQGLSSSIFTRRPEAIFKWIGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2750 511 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Amo13g2750 511 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 463 IPR016163 GO:0016620
Amo13g2750 511 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 488 IPR016162 GO:0016491
Amo13g2750 511 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 508 IPR044638 GO:0004029
Amo13g2750 511 SUPERFAMILY ALDH-like 20 500 IPR016161 GO:0016491
Amo13g2750 511 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 508 - -
Amo13g2750 511 CDD ALDH_F7_AASADH 24 499 - -
Amo13g2750 511 Pfam Aldehyde dehydrogenase family 33 491 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2750 Amo-Chr13 56996612 57001478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2750 1 511 Acyl Lipid Metabolism Gene Families AT1G54100 79.256 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2750 K14085 - gmx:100811186 897.501
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2750 13 56996612 57001478 Amo13g2750 13 56996612 57001478 ECH
Amo13g2750 13 56996612 57001478 Amo03g1427 03 36278567 36284257 hybridization