Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g1427 ATGGGTTCGGAGGACAAAGGGTTGGGGTTCTTTAAGGAGATCGGTTTGGCTTCCAACAATATTGGCTCTTACATTAACGGCCAATGGAAGGCCAACGGTTCTTCAACCACTTCTCTTAGTCCTTCTAACAATCAGGCTATTGCTCAAGTGACCGAACCAACTTTGCAAGATTATGAGGAGGGATTGAATGCTTGCAATGAAGCAGCTAAAATATGGATGACAGTTCCAGCGCCTAAGAGAGGTGAGATTGTAAGACAGATTGGTGAAGCATTAAGGGCTAAGTTGGAGCCTCTTGGTAAATTGGTGTCTCTTGAGATGGGAAAAATTCTTCCCGAAGGAATCGGGGAGGTTCAGGAAATTATCGACATGTGTGATTATGCTGTTGGGCTAAGCAGGCAATTGAATGGACAAATTATACCATCAGAACGTCCGGACCACATGATGCTTGAGACATGGAACCCCCTGGGAATAGTTGGCGTGATAACTGCTTTCAACTTTCCATGTGCTGTTCTAGGGTGGAATGCTTGCATTGCATTAGTCTGTGGTAACTGTGTTGTCTGGAAGGGCGCTCCAACAACTCCATTGATAACTATTGCTGTGACAAAGCTAGTAGCTGAAGTTCTTGAGAAGAACAACTTGCCTGGTGCAATATTCACCTCTTTCTGTGGAGGTGCGGAAATTGGTCAGGCAATAGCAAAAGACACRCGCATTCCCCTGGTCTCATTTACTGGAAGTACAAAGGTCGGCTTGAYGGTCCAGAAAATAGTTAATGAAAGATTTGGCAAATGCCTGCTTGAGCTAAGTGGTAACAATGCAATTATAGTCATGGATGATGCAGACATCAAACTTGCTGTGCGCTCTATTCTGTTTGCTGCTGTAGGAACTGCTGGTCAGCGTTGCACAACATGCCGTAGACTGTTTGTGCATGAGAGTATTTACAAAGATGTACTAGATCAACTTGTTGAAGTCTACAAACAAGTAAAAATTGGGGACCCCCTCGAGAAAGGGACTCTAGTTGGCCCCTTGCATACTCGTTCTTCAGTGGAAAACTTCAAGAATGGTATTTCAGCCATAAAATCACAGGGAGGGAAGATCTTAACAGGTGGGTCCATAGTAGATTCGGAAGGAAATTTTGTACAACCGACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAGGAATTGTTTGGTCCAGTACTATATGTTATGAAATTTCAGACTCTAGAAGAAGCAATTATCTTGAACAATTCTGTTCCTCAAGGGCTGAGTAGTTCAATCTTCACAAGACGACCTGAAGCTATATTCAAGTGGATTGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGTAAACATACCGACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGGGAAAAGGCRACCGGCGGTGGTCGTGAAGCAGGAAGTGACTCTTGGAAGCAATACATGCGCCGTTCTACATGTACCATCAATTATGGAAGTGAACTCCCATTAGCTCAGGGAATAAACTTTGGCTAG 1527 0.4394 MGSEDKGLGFFKEIGLASNNIGSYINGQWKANGSSTTSLSPSNNQAIAQVTEPTLQDYEEGLNACNEAAKIWMTVPAPKRGEIVRQIGEALRAKLEPLGKLVSLEMGKILPEGIGEVQEIIDMCDYAVGLSRQLNGQIIPSERPDHMMLETWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGAEIGQAIAKDTRIPLVSFTGSTKVGLXVQKIVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFVHESIYKDVLDQLVEVYKQVKIGDPLEKGTLVGPLHTRSSVENFKNGISAIKSQGGKILTGGSIVDSEGNFVQPTIVEISPDAPVVKEELFGPVLYVMKFQTLEEAIILNNSVPQGLSSSIFTRRPEAIFKWIGPRGSDCGIVNVNIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g1427 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Amo03g1427 508 SUPERFAMILY ALDH-like 20 497 IPR016161 GO:0016491
Amo03g1427 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 460 IPR016163 GO:0016620
Amo03g1427 508 CDD ALDH_F7_AASADH 24 496 - -
Amo03g1427 508 Pfam Aldehyde dehydrogenase family 34 488 IPR015590 GO:0016491
Amo03g1427 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 IPR044638 GO:0004029
Amo03g1427 508 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 20 505 - -
Amo03g1427 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 37 485 IPR016162 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g1427 Amo-Chr3 36278567 36284257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g1427 1 508 Acyl Lipid Metabolism Gene Families AT1G54100 79.724 0.0 847
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g1427 K14085 - gmx:100811186 914.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2750 13 56996612 57001478 Amo03g1427 03 36278567 36284257 hybridization