Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g2158 TGTGTGTGTGTGTGTGAGAGAGAGATCATGGTGAAAAGAGAGTGCCATCCATTGTTGAAGGGAGAGAGAGGAGAGAGAAAATACAGACATGGGTTTTTTGGGTATGAGATGGAATCACTTGCAAGCATATGTGAGGTTGTGATTCCTCCTTTGCCGCCATTGAAGGATGAAGAAGATGAGCTTAATAACAAGGATGTGACCAAGTCCTTCTCGAACATTTCCGCTTCTCAACATCCATACCCTCATGAGGTTGCAGAAATATTAGTGAAGAGGGGGTTAATAGAAGCAGTAATATTGATTAGAGTGATTTTGTGGGTATTAGCAACAAGGTTGGGGACCTTGTTGCTTTGTGGGTCGCTCAGCTTTGGTGGCAAATGGCCCTTTATCAATAACTTCTCAAACATGGGTTTGGAGAAAAGAGAAAAGGTGGTTCAGAAATGGCTGAAGCATAGGTTCCTTACACCTATAAGACTTGCATTTGCTTACATCAAAGTCTTGTGCGTCTATTGTTTCTTCTCTTCGGTTGATGAGAAGGGAGAGAACCCAGCATGGAAAGCCATTGGGTATGAAGTAGCTGCTGATGAAAAACAGAACAATGTCTCCAACAATAACAGGCCTCTTCAAAAAGGGATCATAGAAACAATGCAAGAACAATCTGACTCAACTCTTCAACAATCCCTTGCCAAGAAAGGCCTCAACGTTACAATGGACACCAAAACCAACACCCTCAAACTCAAATGCGATGCAGTGGTTGTTGGCTCCGGTTGCGGCGGAGGCGTGGCCGCTTCAGTTCTCTCAAGTGCCGGCCACAAGGTGGTTGTTCTTGAGAAAGGAAACTATTTCGCTTCCCAAGACTATTCGTCTCTCGAAGGCCCTTCCATGGATCAATTGTATGAAACTGGAGGGATCCTTGCTTCAGTGGACTCTAGAATTCTGGTTCTCGCAGGATCTACTGTTGGTGGCGGTTCTGCTGTTAACTGGTCGGCGTGCATCAAAACGCCGCAAAATGTGATGAAGGAGTGGTCCGAGGAACACAAGCTTCCCCTCTTTTCGAGTTTAGAGTATCAATCTGCAATGGAAACCGTGTGTGAAAGGATTGGTGTCACAGAATTTTGTAAACAAGAAGGTTTCCAAAACCAAGTGCTGAGAAAAGGGTGTCAGAATCTTGGACTCAAGGTTGATTACGTTCCAAGAAACTCGTCCGGGAATCACTATTGCGGTTCGTGCGGTTATGGTTGTCCGAAAGGAGAGAAAAAAGGGACCCAAGAAACATGGCTTGTGGATGCTGTTGAGAGTGGCGCGGTGATCATTACAGGGTGCAAAGCTGAGAAATTCTTGCTTCAAACAAACACTAACGGACGAAGAAGTGAAAGAAAGAACAAGTGTTTTGGAGTTTTGGCCAAGGCTTTAAGCAGTAGAATCACAATGAAGCTCCAAATTGAAGCCAAGGTAACAGTTTCTGCGGGTGGAGCACTTCTTACACCGCCATTGATGATTTCAAGTGGCTTAAGGAACAAGAACATTGGTAGGAACCTTCATCTTCACCCTGTTCTAATGACTTGGGGATACTTCCCTGATTCGAATTCGGAGTTGGAGGGTAAAGTCTTTGAAGGAGGAATAATCACATCGGTCCATAAGGTTCCTCCAAGAGACTCCGAATCATCAGATACACGAGCTATCATCGAAACGCCTCTGCTTGGACCGGCTTCTTTCGCTTCGCTGTGTCCATGGGAATCAGGAAGAGACTTCAAAGAGAGAATGCTTAAGTACCCGAGAACTTCGCATTTAATCACAATCATTAGAGACACGGCATGTGGGGTGGTTACTTCAGAAGGAAGGATCAGTTATAAACTGTCCGAAATGGATAAAGAGAACATGAGGATTGGACTTCAGCAAGCTCTGAGGATTCTGATAGCCGCGGGGGCTGTGGAAGTAGGAACACACAGAAGTGACGGCCAGAGAATAAAATGTGGTGACATAGGTCATGGTAAAATTGAAGAGTTTCTGGACAATGTTTGGCCGATGGAGGGCGCGCTGTCGCCGGGCGAGAAGTGGAACATATACTGCTCGGCGCATCAGATGGGGAGCTGTAGAATGGGAGCCACTGAGAAAGAAGGGGGTGTTGATGAGAATGGAGAGAGTTGGGAGGCAGAAGGGTTGTTTGTTTGTGATGCAAGTTTGCTTCCAAGTGCAGTTGGTGTCAATCCCATGATCACAATCCAATCAACTGCTTATTGTGTCTCAAATAGGATTGTTGATTATCTTAAGAATGTGTGA 2277 0.4537 CVCVCEREIMVKRECHPLLKGERGERKYRHGFFGYEMESLASICEVVIPPLPPLKDEEDELNNKDVTKSFSNISASQHPYPHEVAEILVKRGLIEAVILIRVILWVLATRLGTLLLCGSLSFGGKWPFINNFSNMGLEKREKVVQKWLKHRFLTPIRLAFAYIKVLCVYCFFSSVDEKGENPAWKAIGYEVAADEKQNNVSNNNRPLQKGIIETMQEQSDSTLQQSLAKKGLNVTMDTKTNTLKLKCDAVVVGSGCGGGVAASVLSSAGHKVVVLEKGNYFASQDYSSLEGPSMDQLYETGGILASVDSRILVLAGSTVGGGSAVNWSACIKTPQNVMKEWSEEHKLPLFSSLEYQSAMETVCERIGVTEFCKQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKKGTQETWLVDAVESGAVIITGCKAEKFLLQTNTNGRRSERKNKCFGVLAKALSSRITMKLQIEAKVTVSAGGALLTPPLMISSGLRNKNIGRNLHLHPVLMTWGYFPDSNSELEGKVFEGGIITSVHKVPPRDSESSDTRAIIETPLLGPASFASLCPWESGRDFKERMLKYPRTSHLITIIRDTACGVVTSEGRISYKLSEMDKENMRIGLQQALRILIAAGAVEVGTHRSDGQRIKCGDIGHGKIEEFLDNVWPMEGALSPGEKWNIYCSAHQMGSCRMGATEKEGGVDENGESWEAEGLFVCDASLLPSAVGVNPMITIQSTAYCVSNRIVDYLKNV* 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g2158 758 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 12 756 - -
Amo13g2158 758 SUPERFAMILY FAD/NAD(P)-binding domain 246 757 IPR036188 -
Amo13g2158 758 PIRSF Lg_Ch_AO 18 758 IPR012400 GO:0046577
Amo13g2158 758 Pfam GMC oxidoreductase 613 746 IPR007867 GO:0016614
Amo13g2158 758 Gene3D - 675 754 IPR036188 -
Amo13g2158 758 Gene3D - 231 544 IPR036188 -
Amo13g2158 758 Pfam GMC oxidoreductase 248 517 IPR000172 GO:0016614|GO:0050660
Amo13g2158 758 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 12 756 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g2158 Amo-Chr13 35713101 35719656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g2158 86 755 Acyl Lipid Metabolism Gene Families AT3G23410 62.259 0.0 835
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g2158 K17756 - gmx:100776182 1174.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2158 13 35713101 35719656 Amo03g0380 03 7047314 7054135 hybridization