Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0380 ATGCGATGCAGTGGTTGTTGGCTCCGGTTGCGGCGGAGGCGTGGCCGCTTCAGTTCTCTCAGTGCCGGCCACAAGGTGGTTGTTCTTGAGAAAGGAAACTATTTCGCTTCCCAAGACTATTCGTCTCTCGAAGGCCCTTCCATGGATCAATTGTATGAAACTGGAGGGATCCTTGCTTCAGTGGACTCTAGAATTCTGGTTCTCGCAGGATCTACTGTTGGTGGCGGTTCTGCTGTTAACTGGTCGGCGTGCATCAAAACGCCGCAAAATGTGATGAAGGAGTGGTCCGAGGAACACAAGCTTCCCCTCTTTTCGAGTTTAGAGTATCAATCTGCAATGGAAACCGTGTGTGAAAGGATTGGTGTCACAGAATTTTGTAAACAAGAAGGTTTCCAAAACCAAGTGCTGAGAAAAGGGTGTCAGAATCTTGGACTCAAGGTTGATTACGTTCCAAGAAACTCGTCCGGGAATCACTATTGCGGTTCGTGCGGTTATGGTTGTCCGAAAGGAGAGAAGAAAGGGACCCAAGAAACATGGCTTGTGGATGCTGTTGAGAGTGGCGCGGTGATCATTACAGGGTGCAAAGCTGAGAAATTCTTGCTTCAAACAAACACTAACGGACGAAGAAGTGAAAGAAAGAACAAGTGTTTTGGAGTTTTGGCCAAGGCTTTAAGCAGTAGAATCACAATGAAGCTCCAAATTGAAGCCAAGGTAACAGTTTCTGCGGGTGGAGCACTTCTTACACCGCCATTGATGATTTCGAGTGGCTTAAGGAACAAGAACATTGGTAGGAACCTTCATCTTCACCCTGTTCTAATGACTTGGGGATACTTCCCTGATTCGAATTCGGAGTTGGAGGGTAAAGTCTTTGAAGGAGGAATAATCACATCGGTCCATAAGGTTCCTCCAAGAGACTCTGAATCATCAGATACACGAGCTATCATCGAAACGCCTCTGCTTGGACCGGCTTCTTTCGCTTCACTGTGTCCATGGGAATCAGGACGAGACTTCAAAGAGAGAATGCTTAAGTACCCGAGAACTTCGCATTTAATCACAATCATTAGAGACACGGCTTGTGGGGTGGTTACTTCAGAAGGAAGGATCAGTTATAAACTATCCGAAATGGATAAAGAGAACATGAGGATTGGGCTTCAGCAAGCTCTGAGGATTCTGATAGCCGCGGGGGCTGTGGAAGTAGGAACACACAGAAGTGATGGGCAGAGAATAAAATGTGGCGACATAGGTTATGGTAAAATTGAAGAGTTTCTGGACAGTGTTTGGCCCATGGAGGGCGCGCTGTCGCCGGGCGAGAAGTGGAACATATACTGCTCGGCGCACCAGATGGGGAGCTGTAGAATGGGAGCCACTGAGAAAGAAGGGGGTGTTGATGAGAATGGAGAGAGTTGGGAGGCAGAAGGGTTGTTTGTTTGTGATGCAAGTTTGCTTCCAAGTGCAGTTGGTGTCAATCCCATGATCACAATCCAATCAACTGCTTATTGTGTCTCAAATAGGATTGTTGATTATCTTAAGAATCTGTGA 1539 0.4691 MRCSGCWLRLRRRRGRFSSLSAGHKVVVLEKGNYFASQDYSSLEGPSMDQLYETGGILASVDSRILVLAGSTVGGGSAVNWSACIKTPQNVMKEWSEEHKLPLFSSLEYQSAMETVCERIGVTEFCKQEGFQNQVLRKGCQNLGLKVDYVPRNSSGNHYCGSCGYGCPKGEKKGTQETWLVDAVESGAVIITGCKAEKFLLQTNTNGRRSERKNKCFGVLAKALSSRITMKLQIEAKVTVSAGGALLTPPLMISSGLRNKNIGRNLHLHPVLMTWGYFPDSNSELEGKVFEGGIITSVHKVPPRDSESSDTRAIIETPLLGPASFASLCPWESGRDFKERMLKYPRTSHLITIIRDTACGVVTSEGRISYKLSEMDKENMRIGLQQALRILIAAGAVEVGTHRSDGQRIKCGDIGYGKIEEFLDSVWPMEGALSPGEKWNIYCSAHQMGSCRMGATEKEGGVDENGESWEAEGLFVCDASLLPSAVGVNPMITIQSTAYCVSNRIVDYLKNL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0380 512 Pfam GMC oxidoreductase 25 271 IPR000172 GO:0016614|GO:0050660
Amo03g0380 512 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 21 510 - -
Amo03g0380 512 Pfam GMC oxidoreductase 367 500 IPR007867 GO:0016614
Amo03g0380 512 SUPERFAMILY FAD/NAD(P)-binding domain 22 511 IPR036188 -
Amo03g0380 512 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 21 510 - -
Amo03g0380 512 Gene3D - 430 508 IPR036188 -
Amo03g0380 512 Gene3D - 15 299 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0380 Amo-Chr3 7047314 7054135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0380 22 505 Acyl Lipid Metabolism Gene Families AT3G23410 64.887 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0380 K17756 - ag:CAP15762 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2158 13 35713101 35719656 Amo03g0380 03 7047314 7054135 hybridization