Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1975 ATGTATAAGAAAAAGACTAGTGACTTGACTGATTCAGTTACCTCCTCCTCCTCAGTTTCTGTTCATCCCAAAAATCGAAAAGTCGTTACTTCCCGTTTCATGTCTTCTCCTTCGCTTGCTGATCATATAACCAATGATAGGTTCAGAGACAGAGAGCATCACAAACCCACCAACATCAATACATCTTCAACCTCCACTTTCTCTTTCACCAGGCAGAAAAGCTCCAAGAACCATGCTAATAACGTTTTTTCCAAAGAGAAAGATGGACCCTCTTTTGCTGCTTCTCTAAGGAACATTGCAAATTTTGCTTCTTCGTCACCGTCCACTGCCATATCATCACCATCATCTTCGTCTTCTTCGGTGAAGAAACAAAGTTCCAACGATGCATTATGCATTGGTCCGGCAAGGTTATCTCTAGATGAAAACGCGTTGTACAAGAAATCCTTGTCTTCTTCACGTAGAGACCACCAAGATTACTATTCTAACGTTTCGAATTCAGTTGAATCGGAACCTGGTTATTTCAATTCTCCATCAAGAACTACATCATCTAGAAAACTTGGTAGAGAGGTTCCTTCCAAGTACATGGTGATGACCACTACTGATGCAGCATCGTTCGACGAGTCCATGCTATCAACGGCGAAGAACAAGAACACAATGTTGCAGAAAAGCAGCTCTATAAAGAGGGTAAACTCGCTTATTAATGGGTACAAGAGTTCAATGTCTCAGTGGGCATTATCTCCTGGGAGATCAGGGTCACCAACTATGTGTGTGGACAAGAAGGATAAACTACCGTCTTCGTTTTCGAGCTTGAGGCCTCAGAGGAATAATAAGAGTGTGGAGAAGATTCTGAGCATGGGTTTTGATCTATTCAGGACAAAGAAATCTTCTTCTTCTTCTTCTAACACTTCTGAGGATCTTCATTTCCTACGCTTGCTTGATAATCGTTTCATGCAGTGGCGGTTCGCTAATGCTAGAGCTCAGGTTGTGAACGAAAATCTTACTCAAACGGTTCAGAGTAATTTAATATGTGCTTTGGATGGTCTCACAAAGTTGAGAAATTCAGTGATGCAAAAGAAGATACAGCTTGAGAGGGAAAAGCTTAGGATGAAGCTCAACCTTGTACTACGTTCTCAAATGAAGCTATTGGAAACATGGGGAGCTATGGAAAGGCAACACATGGCAGAAATTGCTGCAATGAAGGACTGCTTGCATTCTGTTGTTTGTAAACTTCCGCTTTTGGAAGGTGCAACGGTGGACATACAATCAGCATTCATTGCTGAGCGGCAAGCATCTGATCTCACAGATTCCATCAACTCAATGTTAAATAGTTTTTCACTGCCGGCTTATAAGACTGCTGAGTTGGTATCAGAATTAGCAGAAGTTGTTGCACAAGAGAAGTTGCTCTTAGAGGAATTCTATGACCTTTTCCATGCCGTACGTGTCCTTGAGCTCAGAGAAAGAAGCTTGAAATGCAGCCTCATTCAACTTCAATGA 1494 0.4183 MYKKKTSDLTDSVTSSSSVSVHPKNRKVVTSRFMSSPSLADHITNDRFRDREHHKPTNINTSSTSTFSFTRQKSSKNHANNVFSKEKDGPSFAASLRNIANFASSSPSTAISSPSSSSSSVKKQSSNDALCIGPARLSLDENALYKKSLSSSRRDHQDYYSNVSNSVESEPGYFNSPSRTTSSRKLGREVPSKYMVMTTTDAASFDESMLSTAKNKNTMLQKSSSIKRVNSLINGYKSSMSQWALSPGRSGSPTMCVDKKDKLPSSFSSLRPQRNNKSVEKILSMGFDLFRTKKSSSSSSNTSEDLHFLRLLDNRFMQWRFANARAQVVNENLTQTVQSNLICALDGLTKLRNSVMQKKIQLEREKLRMKLNLVLRSQMKLLETWGAMERQHMAEIAAMKDCLHSVVCKLPLLEGATVDIQSAFIAERQASDLTDSINSMLNSFSLPAYKTAELVSELAEVVAQEKLLLEEFYDLFHAVRVLELRERSLKCSLIQLQ* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1975 497 MobiDBLite consensus disorder prediction 58 79 - -
Amo13g1975 497 MobiDBLite consensus disorder prediction 104 126 - -
Amo13g1975 497 MobiDBLite consensus disorder prediction 155 185 - -
Amo13g1975 497 Coils Coil 345 365 - -
Amo13g1975 497 MobiDBLite consensus disorder prediction 148 185 - -
Amo13g1975 497 MobiDBLite consensus disorder prediction 7 42 - -
Amo13g1975 497 MobiDBLite consensus disorder prediction 43 57 - -
Amo13g1975 497 Pfam QWRF family 181 470 IPR007573 -
Amo13g1975 497 MobiDBLite consensus disorder prediction 1 86 - -
Amo13g1975 497 PANTHER AUGMIN FAMILY MEMBER 24 497 - -
Amo13g1975 497 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 24 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1975 Amo-Chr13 29965555 29971200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1975 - - ahf:112732935 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1975 13 29965555 29971200 Amo13g1975 13 29965555 29971200 ECH
Amo13g1975 13 29965555 29971200 Amo03g0650 03 12000041 12004510 hybridization