Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0650 ATGTATAAGAAAAAGACTAGTGATTTCACGGACTCAGTTACCTCCTCGTCCTCAATTTCTGCTCATCCCAAAAATGGAAAAGTCGTTACTTCCTGCTTCATGTCTTCTCCTTCGCTTGCTGATCATATAACCAATGATAGGCTCAGAGACAAAGAGCATCACAAACCCACCAACAGCAACACATCTTCAACCTCCGCTTCTTCTCTCACCAGGCAGAAATTCAAGAACCATGTTAAAAGCACTTCCTCCAAAGAGAACGATGGACCCTCTTTTGCTGCTTCTCTAAGAAACATTGTAAAGTTTGCTTCCTCGTCACCGTCTACTGTCATATCATCACCATCATCTTCCTCTTCCTCGGTGAAGAAACAAAGTTCCAACGATACATTATGCATTGGTCCGGCAAGGTTATCTCTGGATGAAAATGCGTTGTACAAGAAATCCTTGTCTTCTTCACGTAGAAACCACCAAGATTACTATTCTAACGTCTCGAATTCAGTTGAATCGGAAACTGGTTATTTCAATTCTCCATCAAGAACTACATCATCTAGAAAACTTGGTAGAGAGGTTCCTTCCAAGTACATGGTGATGACCACTGATGCAGCATCGTTCGATGAGTCCATGCTATCAACGGCGAAGAACAAGAACACAATGTTGCAGAAAAGCAGCTCTATAAAGAGGGTAAACTCGCTTGTTAATGGGTACAAGAGTTCAATGTCTCAGTGGGCGTTATCTCCTGGGAGATCAGGGTCACCAACTATGTGTGTGGACAAGAAGGATAAACTACCGTCTTCGTTTTCGAGCTTGAGGCCTCAGAAGAATAATAAGAGCGTGGAGAAGATTCTGAGCATGGGTTTTGATCTATTCAGGACAAAGAAATCTTCTTCATCTTCTAACTCTGAGGATCTTCATTTTCTACGCTTGCTTGATAATCGTTTCATGCAGTGGCGGTTCGCTAATACTAGAGCTCAGGTTGTGAACGAAAATCTTACTCATACGGTTCAGAGTAATTTAATATGTGCTTTGGATGGTCTGACAAAGTTGAGAAATTCAGTGATGCAAAAGAAGATACAGCTTGAGAGGGAAAAGCTTAGGATGAAGCTCAACCTTGTACTACGTTCTCAAATGAAGCTATTGGAAACATGGGGAGCTATGGAAAGGCAACACATGGCAGAAATTGCTGCAATGAAGGACTTCTTGCATTCTGTTGTTTGTAAAGTTCCGCTTTTGGAAGGTGCAACGGTGGACATACAATCAGCATTCATTGCTGAGCGGCAAGCATCTGATCTCACAGATTCCATCAACTTAATGTTAAATAGTTTTTCACTGCCGGCTTATAAGACTGCTGAGTTGGTATCAGAATTAGCAGAAGTTGTTGCACAAGAGAAGTTGCTCTTAGAGGAATTCTATGACCTTTTCCATGCCGTACGTGTCCTTGAGCTCAGAGAAAGAAGCTTGAAGTGCAGCCTCATTCAACTTCAATGA 1482 0.4197 MYKKKTSDFTDSVTSSSSISAHPKNGKVVTSCFMSSPSLADHITNDRLRDKEHHKPTNSNTSSTSASSLTRQKFKNHVKSTSSKENDGPSFAASLRNIVKFASSSPSTVISSPSSSSSSVKKQSSNDTLCIGPARLSLDENALYKKSLSSSRRNHQDYYSNVSNSVESETGYFNSPSRTTSSRKLGREVPSKYMVMTTDAASFDESMLSTAKNKNTMLQKSSSIKRVNSLVNGYKSSMSQWALSPGRSGSPTMCVDKKDKLPSSFSSLRPQKNNKSVEKILSMGFDLFRTKKSSSSSNSEDLHFLRLLDNRFMQWRFANTRAQVVNENLTHTVQSNLICALDGLTKLRNSVMQKKIQLEREKLRMKLNLVLRSQMKLLETWGAMERQHMAEIAAMKDFLHSVVCKVPLLEGATVDIQSAFIAERQASDLTDSINLMLNSFSLPAYKTAELVSELAEVVAQEKLLLEEFYDLFHAVRVLELRERSLKCSLIQLQ* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0650 493 Pfam QWRF family 145 466 IPR007573 -
Amo03g0650 493 Coils Coil 341 361 - -
Amo03g0650 493 MobiDBLite consensus disorder prediction 7 26 - -
Amo03g0650 493 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 12 493 - -
Amo03g0650 493 MobiDBLite consensus disorder prediction 1 26 - -
Amo03g0650 493 PANTHER AUGMIN FAMILY MEMBER 12 493 - -
Amo03g0650 493 MobiDBLite consensus disorder prediction 58 76 - -
Amo03g0650 493 MobiDBLite consensus disorder prediction 48 89 - -
Amo03g0650 493 MobiDBLite consensus disorder prediction 105 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0650 Amo-Chr3 12000041 12004510 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0650 - - ahf:112732935 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1975 13 29965555 29971200 Amo03g0650 03 12000041 12004510 hybridization