Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1808 ATGAGTTGGAAAAACAGGGTAGAGGTTCTTCCTTCTAGAAGCATTGTAACTCAAAGATGGGCACTTTTGCTTTGTGTCGCAAGTTTCTGTGCTGGGATGCTCTTCACAAACAGGATGTGGACTGTTCCTGAACCAAAAGGACTTGCGCGATCAACATCCGCAGAATCCGAAAAATTGAATGTAGTTTCGGAGGGTTGCAATTCGAGAATTTTGCAAGAGACTCAAGATATTTATAAGGAAGCTTTCAAGGGTCATGGTTCCTTGCAAAATTTGGACAAGACTATTTCAAATTTGGAGATGGAATTGGCTGCTGCAAGGGCTGCTCAAGAATCAATAAGAAGTGGCGCTCCTGTTCCAGACGATATCAGGATGTCCGAATCATCCGGGAAGCGAAAGTACCTAATGGTTGTAGGTATTAACACTGCATTCAGCAGCCGGAAAAGAAGAGACTCGGTTCGTGCCACCTGGATGCCACAAGGTGAGAAAAGGAAAAGGCTGGAGGAGAAGGGCATTATTATGCGCTTTGTAATTGGTCACAGTGCTACATCAGGGGGTATCCTGGATAGAGCTATTGAAGCAGAGGACAGAAAGCATGGAGATTTCTTGAGGCTGAATCATGTGGAAGGATACCTTGAATTGTCGGCAAAGACAAAGACATACTTTTCGACTGCTGTTAACTTATGGGATGCTGACTTCTATGTCAAAGTCGATGATGATGTTCATGTAAATATAGCAACATTGGGAGATACTCTAGCTAGACACCGATCAAAACAGAGGGTATACATTGGATGCATGAAATCTGGACCTGTACTATCTCAAAAAGGAGTAAGGTACCACGAACCGGAATATTGGAAGTTCGGTGAGAATGGAAACAAGTACTTTCGTCACGCCACAGGGCAGTTGTATGCCATTTCAAACGATTTGGCTACTTACATTTCAATTAACCAGAATGTTCTTCACAAGTATGCCAATGAGGATGTGTCGCTTGGATCATGGTTTATTGGACTCGATGTGGAGCATATCGATGATCGAAGACTCTGCTGTGGCACTCCTCCAGACTGTGAATGGAAGGCTCAGGCAGGCAACATTTGCGTCGCTTCGTTCGATTGGAGCTGCAGTGGAATCTGCAGGTCTGCGGATCGGATGAAAGAGGTACATAGAAGGTGTGGAGAAGGTGAGAATGTTTTGTGGAGTGCCTCTTTCTAG 1206 0.4453 MSWKNRVEVLPSRSIVTQRWALLLCVASFCAGMLFTNRMWTVPEPKGLARSTSAESEKLNVVSEGCNSRILQETQDIYKEAFKGHGSLQNLDKTISNLEMELAAARAAQESIRSGAPVPDDIRMSESSGKRKYLMVVGINTAFSSRKRRDSVRATWMPQGEKRKRLEEKGIIMRFVIGHSATSGGILDRAIEAEDRKHGDFLRLNHVEGYLELSAKTKTYFSTAVNLWDADFYVKVDDDVHVNIATLGDTLARHRSKQRVYIGCMKSGPVLSQKGVRYHEPEYWKFGENGNKYFRHATGQLYAISNDLATYISINQNVLHKYANEDVSLGSWFIGLDVEHIDDRRLCCGTPPDCEWKAQAGNICVASFDWSCSGICRSADRMKEVHRRCGEGENVLWSASF* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1808 401 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 10 393 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo13g1808 401 Coils Coil 88 108 - -
Amo13g1808 401 Pfam Galactosyltransferase 147 343 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo13g1808 401 Gene3D - 130 346 - -
Amo13g1808 401 PANTHER BETA-1,3-GALACTOSYLTRANSFERASE 4-RELATED 10 393 - -
Amo13g1808 401 Pfam Domain of unknown function (DUF4094) 18 107 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1808 Amo-Chr13 26027825 26031671 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g1808 12 401 Glycosyltransferase AT1G05170 77.582 0.0 664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1808 K20855 - gmx:100776912 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1197 08 19698437 19702681 Amo13g1808 13 26027825 26031671 PCT
Amo13g1808 13 26027825 26031671 Amo08g1197 08 19698437 19702681 PCT