Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1197 ATGAATTTGAAGAGCAGAGGAGAGGTTCTTCTTCCTCATAGAAGCTTTTTGTCTCAGAGATGGATGATTTTTCTTTGTATTGGAAGCTTCTGTGCTGGGATGCTATTCACCAACAGGATGTGGACTATTCCCGAACCTAAAGGACTTGCAAGGACAACAGCTATGGAAGCTGAAAAATTGAATGTTGTTTCGGAGGGTTGCAACTCAAGAATTTTGCAAGAAAAGGAAGTGAAGCGCGAAACGAGAAGCATCTATAAGGAAGTTTTCAAAACACAAAATGCCATGCGAACATTGGACAAAACTATTTCAAACTTGGAGATGGAGTTAGCTGCTGCAAAGGCAGCTCAGGAGTCGATTCGCAATGGCGCTCCTCTATCAGAAGATATAAAGGCAGTTGAATCAACTCCTAGGAGAAGGTACCTCATGGTCATAGGAATCAACACTGCTTTTAGCAGCAGGAAAAGAAGAGACTCCGTCCGCCAAACCTGGATGCCTCAAGGTGAGAAAAGAAAGAAGCTAGAGGAAGAGAAAGGCATTATCATCAGATTTGTAATTGGTCATAGTGCTACATCAGGTGGTATATTAGACAGAGCTATAGAAGCAGAAGATAGGAAGCATGGAGATTTCTTGAGGCTGGATCATGTTGAAGGGTACCTTGAATTATCAGCAAAGACAAAGACCTACTTTGCAACTGCTGTTAACTTATGGGATGCTGATTTCTACATTAAAGTTGATGATGATGTTCATGTAAATATAGCAACACTTGGAGAGACTCTAGTTAGACACCGGTCGAAACCACGAGTATACATCGGATGCATGAAATCCGGGCCTGTTCTTTCCCAAAAAGGTGTAAGGTACCATGAACCAGAATACTGGAAATTCGGTGAGTCTGGAAACAAGTACTTCCGCCATGCCACAGGACAGTTGTATGCCATTTCAAAAGATCTTGCTACATATATTTCAATGAACCAGCATGTTCTTCACAAGTATGCCAATGAAGATGTCTCACTAGGCTCATGGTTTATTGGACTTGATGTGGATCATATTGATGATAGGAGACTCTGCTGTGGCACTCCACCAGATTGTGAATGGAAAGCTCAAGCAGGGAATGTGTGTGTAGCTTCATTTGATTGGACATGCAGTGGAATTTGCAGGTCTGCTGAGAGGATCAAAGAGGTTCATAGAAGATGTGGAGAAGGTGAAAAAGCTTTGTGGAATGCCTCTTTCTAA 1230 0.4211 MNLKSRGEVLLPHRSFLSQRWMIFLCIGSFCAGMLFTNRMWTIPEPKGLARTTAMEAEKLNVVSEGCNSRILQEKEVKRETRSIYKEVFKTQNAMRTLDKTISNLEMELAAAKAAQESIRNGAPLSEDIKAVESTPRRRYLMVIGINTAFSSRKRRDSVRQTWMPQGEKRKKLEEEKGIIIRFVIGHSATSGGILDRAIEAEDRKHGDFLRLDHVEGYLELSAKTKTYFATAVNLWDADFYIKVDDDVHVNIATLGETLVRHRSKPRVYIGCMKSGPVLSQKGVRYHEPEYWKFGESGNKYFRHATGQLYAISKDLATYISMNQHVLHKYANEDVSLGSWFIGLDVDHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWTCSGICRSAERIKEVHRRCGEGEKALWNASF* 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1197 409 Coils Coil 95 115 - -
Amo08g1197 409 Pfam Galactosyltransferase 154 351 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo08g1197 409 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 12 401 IPR002659 GO:0006486|GO:0016020|GO:0016758
Amo08g1197 409 Pfam Domain of unknown function (DUF4094) 18 114 IPR025298 -
Amo08g1197 409 Gene3D - 135 353 - -
Amo08g1197 409 PANTHER HEXOSYLTRANSFERASE 12 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1197 Amo-Chr8 19698437 19702681 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo08g1197 1 409 Glycosyltransferase AT1G05170 78.484 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1197 K20855 - gmx:100793931 771.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo08g1197 08 19698437 19702681 Amo13g1808 13 26027825 26031671 PCT
Amo13g1808 13 26027825 26031671 Amo08g1197 08 19698437 19702681 PCT