Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g1770 ATGGCTACGAACAACACGGGGGTTATATTGAAGATTGCTTTAGGGGTTGTGGCACTGTGCATAGCAGGGTACATAGTGGGTCCCCCTCTTTACTGGCACTTAATGGAAGGATTGCTTGATGTCAACCACTCTTCTTCTTCTTCTTCTCCTTCTTGTGCTCCTTGTCTCTGTGATTGTTCTTCCGAACCCATACTTTCAATTCCACAAGGTCTGAGTAACACTTCATTTGGAGATTGTGCAAAGCCTGATCCGGAGGTGAGTGGAGACACCGAAAAGAATTTTGGCGAACTATTGTCAGAAGAACTAAAGCTAAGGGAGAACCAAGCTTTGGAACAACAGCAGCATGCTGACATGGCACTCCTCGAGGCGAAGAAGATCGCATCTTCGTATCAAAAGGAAGCAGACAAGTGCAATTCAGGGATGGAGACGTGCGAGGAGGCGAGGGAGAAAGCGGAGTTAACCTTGGTAGCTCAGAAGAAGCTGACTGCATTGTGGGAACTTAGAGCACGGCAGAAAGGGTGGAAAGAAGGGGCTGCCAAGTCTCAAGGAAATGTACAAACTAAACTGCTTAGAGAATAG 579 0.4715 MATNNTGVILKIALGVVALCIAGYIVGPPLYWHLMEGLLDVNHSSSSSSPSCAPCLCDCSSEPILSIPQGLSNTSFGDCAKPDPEVSGDTEKNFGELLSEELKLRENQALEQQQHADMALLEAKKIASSYQKEADKCNSGMETCEEAREKAELTLVAQKKLTALWELRARQKGWKEGAAKSQGNVQTKLLRE* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g1770 192 PANTHER EXPRESSED PROTEIN 8 181 - -
Amo13g1770 192 Pfam Protein of unknown function (DUF1068) 9 177 IPR010471 -
Amo13g1770 192 PANTHER - 8 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g1770 Amo-Chr13 25378585 25380449 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g1770 - - adu:107477705 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g1770 13 25378585 25380449 Amo13g1770 13 25378585 25380449 ECH
Amo18g0772 18 11045396 11047254 Amo13g1770 13 25378585 25380449 PCT
Amo08g1215 08 20012702 20014573 Amo13g1770 13 25378585 25380449 PCT
Amo13g1770 13 25378585 25380449 Amo18g0772 18 11045396 11047254 PCT
Amo13g1770 13 25378585 25380449 Amo08g1215 08 20012702 20014573 PCT