Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo08g1215 ATGGGTGTGAGTGTGAATGGCGTGGCGGTGAGGGTAGCTTTGGCGGTGGTGGCGCTCTGCATTGGAGGCTACATTTTGGGTCCCCCTCTCTATTGGCACCTCCGAGAAGCCATTGCTGCTTCTTCTTCTGTTTCTCTTTCTTCTTGTGCTCCTTGCGTCTGCGATTGCTCTTCCCAACCCCTTATTTCTCTTCCTCAAGGTCTTAGCAACGCTTCAATTGGAGATTGTGCAAAGCACAACCCGGAGGTGAATGGAGACACCGAAAAGAACTTTGTGGAGCTACTGTCGGAAGAATTGAAGCTGCGGGAAACTCAAGCCTTGGAAAACCAGCACCGTGCCGACATAGCCCTACTTGAGGCCAAGAAGGTTGCATCTCAGTATCAGAAGGAATCAGACAAGTGCAATTCAGGGATGGAGACGTGTGAGGAGGCCAGGGAAAGGTCCGAGGCGTCATTAGTGGCACAGAAGAAGCTAACTGCGTTGTGGGAGCTGAGAGCTCGCCAGAAAGGGTGGAAAGAAGGGGCCACCAAATCCAGTTCAAAGTCTCAAGCAAAAGCAAAAGTACAGAGTGCTTAG 576 0.5139 MGVSVNGVAVRVALAVVALCIGGYILGPPLYWHLREAIAASSSVSLSSCAPCVCDCSSQPLISLPQGLSNASIGDCAKHNPEVNGDTEKNFVELLSEELKLRETQALENQHRADIALLEAKKVASQYQKESDKCNSGMETCEEARERSEASLVAQKKLTALWELRARQKGWKEGATKSSSKSQAKAKVQSA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo08g1215 191 PANTHER EXPRESSED PROTEIN 8 188 - -
Amo08g1215 191 PANTHER EXPRESSED PROTEIN 8 188 - -
Amo08g1215 191 Pfam Protein of unknown function (DUF1068) 9 174 IPR010471 -
Amo08g1215 191 MobiDBLite consensus disorder prediction 175 191 - -
Amo08g1215 191 MobiDBLite consensus disorder prediction 168 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo08g1215 Amo-Chr8 20012702 20014573 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo08g1215 - - adu:107477705 263.462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0772 18 11045396 11047254 Amo08g1215 08 20012702 20014573 hybridization
Amo08g1215 08 20012702 20014573 Amo13g1770 13 25378585 25380449 PCT
Amo13g1770 13 25378585 25380449 Amo08g1215 08 20012702 20014573 PCT