Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0623 ATGCTCTCCAAGCCTTCTTCTGCAATGCCCACCTTCCCTTCTTCCTCTGAGGATAGAAATGGCTTCTGCGTGTGGCCGGATGTGAGACAACTTTGCATTCGAAAGAGTCTTCTATACGGAGTTATGAGACTCTTTTCTTTACCATTGAAAACACTGCGCGGAGCGAGTCGGTCACTGAGAGTAGACCAGTTTTGCAGTGTAGTGAACATTTCCTCCTCATTGCAGATTGAATTGGTGCCTTGCCTTGGGGACAATTATGCATACCTTTTACATGATACAGACACTGGGACAGTTGGTGTCGTTGATCCTTCTGAAGCGGCACCTATCATAGATGTTTTGAGCAAGAAAGATCGAAATTTGACGTATATACTGAACACTCACTACCATCATGATCACACTGGTGGAAATACAGAGTTGAAAGAAAGGTATGGGGCAAAGGTAATTGGTTCGGAAGTAGACAATGACAAAATTCCCGGAATCGATATCTCTTTGAGTGATGGAGATACATGGATGTTTGCAGGCCATGAGGTCCTTATAATGGCTACACCTGGTCACACCCAAGGTCACATAAGTTTCTACTTCCCTGGATCCGGAGCGATTTTCACAGGAGACACCTTGTTCAGCCTATCATGTGGCAAGCTCTTCGAAGGAACCGCTGAACAGATGTTATCTTCTCTTAAAAAGATCATGTCTTTGCCAGATAATACAAATATATACTGTGGCCATGAGCACACACTGAGTAATTCTGAGTTTGCATTGTCTATAGAACCCGAAAACGAGGAACTTCAATTGTATGCTGCACATGTAGCCCACCTTAGGAATAAAGGCTTGCCGACGATTCCAACTACATTGAAGGTAGAAAAGGCTTGCAATCCATTCCTTCGCACGTTTAGCACCAAAATCCGGCGGAAGTTAAATATTGCAGTCACGGCAGATGATGCAGAAGCGCTGCGAATTATCCGGCAAGCGAAGGATAATTTTTAG 984 0.4421 MLSKPSSAMPTFPSSSEDRNGFCVWPDVRQLCIRKSLLYGVMRLFSLPLKTLRGASRSLRVDQFCSVVNISSSLQIELVPCLGDNYAYLLHDTDTGTVGVVDPSEAAPIIDVLSKKDRNLTYILNTHYHHDHTGGNTELKERYGAKVIGSEVDNDKIPGIDISLSDGDTWMFAGHEVLIMATPGHTQGHISFYFPGSGAIFTGDTLFSLSCGKLFEGTAEQMLSSLKKIMSLPDNTNIYCGHEHTLSNSEFALSIEPENEELQLYAAHVAHLRNKGLPTIPTTLKVEKACNPFLRTFSTKIRRKLNIAVTADDAEALRIIRQAKDNF* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0623 327 CDD hydroxyacylglutathione_hydrolase_MBL-fold 79 242 IPR035680 -
Amo13g0623 327 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 1 327 - -
Amo13g0623 327 SMART Lactamase_B_5a 84 242 IPR001279 -
Amo13g0623 327 Pfam Metallo-beta-lactamase superfamily 86 242 IPR001279 -
Amo13g0623 327 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 77 327 IPR017782 GO:0004416|GO:0019243
Amo13g0623 327 PANTHER BETA LACTAMASE DOMAIN 1 327 - -
Amo13g0623 327 Gene3D - 74 327 IPR036866 -
Amo13g0623 327 Hamap Hydroxyacylglutathione hydrolase [gloB]. 74 327 IPR017782 GO:0004416|GO:0019243
Amo13g0623 327 Pfam Hydroxyacylglutathione hydrolase C-terminus 243 327 IPR032282 -
Amo13g0623 327 SUPERFAMILY Metallo-hydrolase/oxidoreductase 74 325 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0623 Amo-Chr13 7730034 7733634 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0623 K01069 - gmx:100805615 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0019 18 875348 878728 Amo13g0623 13 7730034 7733634 PCT
Amo13g0623 13 7730034 7733634 Amo18g0019 18 875348 878728 PCT