Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3429 ATGGGTTTTTGTTATTGGTGTGGTTCTTCATCATTGAAGCCATTGTTGTTGATGGTTGTTCCTCTTGTAATGGTTATGGCACTTACTTTTGCTTTTCTGAATGGTCCAAGTAGTAACAATAATAATACCTTGGTGCCACTACTTTGGAGCTCTATAACTCCTTCTTCTTCTCCTTCTTCTTCTTCTTTATTCATCAACAATGGTGATGATAACAAAACTATGCATGCCTTTGATGATCATCACATGTCTTTCTTCAATAACCTCTCTTACTTCTCTCCTCCAGCACTTTCTCTTCCGGAACAATATAACCAAACTGAGGTAGTTGATCATGACATCTCAAAAACTTGGGCAAGTTCAGCTCCTTTGAATGAATCTTATGTTGTTCCCCAAAGAAAATTCAGCATCTTAGATAGAACTGAAGCAGGTTTGCTACAAGCTAGAGCTGCTATTAGAGATGCAAGAAATTGGAATCAAACACTTGATCAAGACTATGTTCCAATAGGTCCAGTCTATAGGAATGCCAAAGCATTTCACAGGAGCTATTTAGAAATGGAGAAACAATTCAAAGTATTTGTCTATAAAGAAGGGGAGCCTCCAATTTTTCATAATGGACCATGCAAAAGCATATACTCAATGGAGGGTAATTTCATCCATGCTATTGAGATGAATGAGCAATTTCGAACAAGGGATCCTAAGAAAGCTCATGTGTTCTTCCTTCCCTTCAGTGTAGTAATGATGGTCCGATTTGTGTACGAGAGGAACTCGCGCGATTTCGGCCCCATAAGAACAACCGTCAAGGATTATATCAATCTCATTGCTGGAAGATATCCTTATTGGAATCGAAGCCTTGGTGCTGATCATTTCATGCTTTCTTGCCATGATTGGGGGCCAGAGACTTCATTCTCTATTCCTTACTTATACAAGAACTCTATACGTGTATTGTGCAATGCCAACACCTCTGAAGGATTCAACCCTACAAAAGATGTTTCTCTTCCTGAAATCAATCTCCAAACAGGTACAATAGATGGTTTTCTTGGTGGGCCTTCCGCATCTAAACGCTCAATTTTGGCCTTCTTCGCCGGTGGGGTTCATGGGCCCATTAGGCCCATTTTACTTGAGCAATGGGAGAACAAGGATGAAGATATCAAAGTCCACAAGTACCTTCCAAAGGGGGTTTCCTACTATGGTATGCTTAGAAAGAGCAAGTTTTGTCTTTGCCCTAGTGGGTATGAGGTGGCAAGCCCAAGGGTAGTTGAGGCAATTTACACAGGTTGTGTTCCTGTGCTTATTTCTGACCACTATGTCCCTCCATTTAGTGATGTCTTGAATTGGAAGTCTTTTTCAGTTGAAGTTTCTTCAAGAGACATTCCAAAATTGAAGGAGATTCTAACAAACATCTCATCAAGACAATATATAAGGATGCAACGGAGAGTGGACAACATTAGGAGACACTTTGAAGTGCATTATCCTCCTAAAAGATTTGATGTCTTCCATATGATACTTCATTCAGTTTGGCTTAGGAGATTAAACATTAGAATTTATGATGATTAA 1551 0.3959 MGFCYWCGSSSLKPLLLMVVPLVMVMALTFAFLNGPSSNNNNTLVPLLWSSITPSSSPSSSSLFINNGDDNKTMHAFDDHHMSFFNNLSYFSPPALSLPEQYNQTEVVDHDISKTWASSAPLNESYVVPQRKFSILDRTEAGLLQARAAIRDARNWNQTLDQDYVPIGPVYRNAKAFHRSYLEMEKQFKVFVYKEGEPPIFHNGPCKSIYSMEGNFIHAIEMNEQFRTRDPKKAHVFFLPFSVVMMVRFVYERNSRDFGPIRTTVKDYINLIAGRYPYWNRSLGADHFMLSCHDWGPETSFSIPYLYKNSIRVLCNANTSEGFNPTKDVSLPEINLQTGTIDGFLGGPSASKRSILAFFAGGVHGPIRPILLEQWENKDEDIKVHKYLPKGVSYYGMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSSRDIPKLKEILTNISSRQYIRMQRRVDNIRRHFEVHYPPKRFDVFHMILHSVWLRRLNIRIYDD* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3429 516 Pfam Exostosin family 185 465 IPR040911 -
Amo12g3429 516 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 92 514 IPR004263 GO:0006486|GO:0016757
Amo12g3429 516 PANTHER EXOSTOSIN FAMILY PROTEIN 92 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3429 Amo-Chr12 123469090 123473216 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3429 - - aip:107626430 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3429 12 123469090 123473216 Amo12g3429 12 123469090 123473216 ECH
Amo06g1512 06 45182653 45185909 Amo12g3429 12 123469090 123473216 PCT
Amo12g3429 12 123469090 123473216 Amo06g1512 06 45182653 45185909 PCT