Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1512 ATGGCTAACAACTGGAGATGCAGTAGTTGTAATTGTTTTTTGTGGAGGGGCTCATCATCATCAGAGTCTTATTCTTCTTCTTCATCAACGAAGCTATTGTTGTTCATGTTACCTCTTCTAGTCGTTGCTGGGCTTATTTCAGTGTTAGGTCCCAACAACCCCTCCAATTTAGTTGATATTGCTAAAAAGCCCCTCTCAGATGCCTCTGTTACTGTCACCACGGTGGAGTCACCGCCGCTAACTAAAGTAGTGAAGAAGAAGCAACGCGGGGAAGGGCTGGTGGTGGTGGCCGTCAATAATGCTCACGGCGGAAAACAGGAGGAGGCCAAAGCAATCTCCGAAACACTCTTCAATCACTCCTCTACTCCCTCACTTCCCATTCAGGCCATAGAAACGTTTATTCAATCTAACACCACCGAGGGAATTCTCAATGCCTCCTCCAAAACCTGGCCCATCGTGGCTTCCATGAATGAATCTTATAACCCTATTGAAACACCGAGGCGGCAAAGAAAATTCAGCATTTTAGATAGAACTGAAGCTGGTCTACTACAAGCTCGAGTTGCAATTAGAGAAGCAAAAAACAGGAGTCAATTACAAGATATAGACTATGTTCCAATTGGACCAATGTATCATAATGCTAAAGCATTTCACAGGAGTTACTTAGAGATGGAGAAACTGTTCAGGGTATATGTGTACGAAGAAGGGGAACATCCTGTGTTCCATAACGGCCCTTGCAAGAACATATACTCCATAGAGGGGAGTTTCATCCATGGCATTGAGATGAACGAGCGATTCCGAACAAGAGATCCTGAGAAAGCACATGTATACTTCCTTCCTTTTAGCGTAGCAATGATGGTGCAATTCGTCTATGTACGTGACTCTCGTGATTTCGGACCCATACGAAAAACAGTCACTGACTATGTCAATCTCGTAGCCGGAAGATATCCATATTGGAACCGAAGCTTAGGTGCTGATCATTTCATGCTCTCTTGTCATGATTGGGGGCCGGAGGCATCATTTTCGGTACCAAACTTGGGGAAGAATTCAATTCGAGTGCTGTGCAATGCTAACACATCGGAGGGATTCAAACCTACAAAGGACGTGTCTCTTCCCGAAATAAATCTCCTAACGGGAACATTAGACGGTTTCCTTGGTGGGCCATCTGCATCAAAGCGTCCAGTTCTAGCTTTCTTTGCTGGTGGGCTTCACGGGCCCGTTAGGCCCGTTCTTCTCGAGCACTGGGAGAACAAAGACGAGGACATTCAGGTCCACAAGTACCTACCAAAGGATGTGGCCTACTACACAATGCTGAGGAAAAGCAAGTTCTGTCTGTGTCCAAGTGGGTACGAGGTTGCAAGCCCAAGGGTAGTTGAGGCAATTTACACTGGTTGTGTACCAGTGCTGATTTCGGACCATTATGTCCCTCCGTTCAGTGATGTGTTGAATTGGAAAGCGTTCTCCGTTGAGGTTTCGGTTAAGGATATTCCTAGACTGAAGGAGATTTTGTTGAGCATTTCTCCTAGGCAGTATATAAGGATGCAGAGAAGAGTGGGACAAATTAGGAGACATTTTGAGGTACATTCTCCACCAAAGAGGTTTGATGTATTCCATATGATCCTTCATTCCGTGTGGCTCAGACGGTTAAACTTTAGAATTCATGATGATCTATAA 1671 0.4506 MANNWRCSSCNCFLWRGSSSSESYSSSSSTKLLLFMLPLLVVAGLISVLGPNNPSNLVDIAKKPLSDASVTVTTVESPPLTKVVKKKQRGEGLVVVAVNNAHGGKQEEAKAISETLFNHSSTPSLPIQAIETFIQSNTTEGILNASSKTWPIVASMNESYNPIETPRRQRKFSILDRTEAGLLQARVAIREAKNRSQLQDIDYVPIGPMYHNAKAFHRSYLEMEKLFRVYVYEEGEHPVFHNGPCKNIYSIEGSFIHGIEMNERFRTRDPEKAHVYFLPFSVAMMVQFVYVRDSRDFGPIRKTVTDYVNLVAGRYPYWNRSLGADHFMLSCHDWGPEASFSVPNLGKNSIRVLCNANTSEGFKPTKDVSLPEINLLTGTLDGFLGGPSASKRPVLAFFAGGLHGPVRPVLLEHWENKDEDIQVHKYLPKDVAYYTMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKAFSVEVSVKDIPRLKEILLSISPRQYIRMQRRVGQIRRHFEVHSPPKRFDVFHMILHSVWLRRLNFRIHDDL* 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1512 556 Pfam Exostosin family 224 503 IPR040911 -
Amo06g1512 556 PANTHER EXOSTOSIN FAMILY PROTEIN 129 553 - -
Amo06g1512 556 CDD Glycosyltransferase_GTB-type 397 488 - -
Amo06g1512 556 Coils Coil 175 195 - -
Amo06g1512 556 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 129 553 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1512 Amo-Chr6 45182653 45185909 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1512 - - gmx:100806278 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g1512 06 45182653 45185909 Amo12g3429 12 123469090 123473216 PCT
Amo12g3429 12 123469090 123473216 Amo06g1512 06 45182653 45185909 PCT