Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3427 ATGGAAAACACAACATTGAAAGCAGAGAATCTTAAACCTGTTCTTCTCAAAGCTGGTGTTCCTTTAGCTGTGTCCATGGCTGGTGTCATCTATGCATGGATCATGGCAAAGAAAATCAACAACAAAGCCGGAATCACGGAATCCGAAGAAGATTCCGGTCATGGAACCATGCATGAGGAATGTTCTCATAGCTTTTCTTCTATGGAAGATGAAGAAGAAGAAGAAAAACAACATGGCATCACAATTGGTAGCCATATTAGTGTTCCTTCTGAGAAATTGGTGATCCATGAAAATCATTGTTTTGAACAAGATATTATTAGTGGTTTAAGAAGCAGGATTGAAGGTTTGCAAATGAGAGAATTGGCATTGAGTTTGCAATTTGATAGGTATTGTGACATGAAAGAGCAAGAATCTTTGTTGGTAGAAATCAAGAACTTGTTATGGTTAGAGAGGGCGCGAGTCGAGTTCTTAGACAAGGAGATCTCATTTCTGGAGACAGAGAACACGAAATTGGAGAATTTTATGGATCAATACCTTAAAATTCTTGGGCAAATTGAGAAATGGAAATCAGAGAACAAAATACTTGAAAAGAAGGTTGAAAGGTTGAAGAAGAGATCAAATGCGCAACGACGACTAATTAAGGAGCAAAATGTGAGGATAAGAGCAGAGGAAACAGAAATTCTGAGGAGTCATGAGGCATTACAAAGAAGTGTTTGTGTGATGAATAAGTTGGAGGATGAGATGAGAGAGATGCAAAAGGTTTTGGATGAGTTACAATTTGAGAAGAATGAACTTCTAAAGAAGCTTCATTCACAAGAAAAAGCATATGCAACTAAGATTAAAGAAGGATTTGTAAGCAAGGAAGATTACAACAAGATTCTCAATGAATTGGAGCAAATCAAGAAGGAACGTGCAGCTGAAATTGAAGAACTTAATCAATTGCGTTTGTCTAATAATTCTTGCTTATTAAACCATGAACAAGAACAAGAACAAGAACATGATCATTATAAGGTGCTAGAATTTGAAGAAAAGAGTGCAATCATGCATTATGAATCAGACCATGAATTGCATCATTCTTTTATGGAGCATTGTAACAATAATATCCCTTCTTGCTTTGGTTCAACACAAAGTGATAATCATCATCATCATGATCATGGTTTCTCAAGAAGGAAAAGATTGATAAGAAGGCTTAGAAGGTGGGTGGAAGGAAGTGATGAAAAGGTTGTTAGAGTGAAACCTATGAATTTTGATCCTCATCATGTTCCTAATTCAAGGAACTCTTGCTCCTCAATCTAG 1296 0.365 MENTTLKAENLKPVLLKAGVPLAVSMAGVIYAWIMAKKINNKAGITESEEDSGHGTMHEECSHSFSSMEDEEEEEKQHGITIGSHISVPSEKLVIHENHCFEQDIISGLRSRIEGLQMRELALSLQFDRYCDMKEQESLLVEIKNLLWLERARVEFLDKEISFLETENTKLENFMDQYLKILGQIEKWKSENKILEKKVERLKKRSNAQRRLIKEQNVRIRAEETEILRSHEALQRSVCVMNKLEDEMREMQKVLDELQFEKNELLKKLHSQEKAYATKIKEGFVSKEDYNKILNELEQIKKERAAEIEELNQLRLSNNSCLLNHEQEQEQEHDHYKVLEFEEKSAIMHYESDHELHHSFMEHCNNNIPSCFGSTQSDNHHHHDHGFSRRKRLIRRLRRWVEGSDEKVVRVKPMNFDPHHVPNSRNSCSSI* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3427 431 Coils Coil 234 275 - -
Amo12g3427 431 Coils Coil 185 219 - -
Amo12g3427 431 MobiDBLite consensus disorder prediction 45 71 - -
Amo12g3427 431 Coils Coil 287 317 - -
Amo12g3427 431 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 429 IPR040265 -
Amo12g3427 431 PANTHER CHUP1-LIKE PROTEIN 1 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3427 Amo-Chr12 123432640 123434771 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3427 - - adu:107476384 832.787
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3427 12 123432640 123434771 Amo12g3427 12 123432640 123434771 ECH
Amo06g1509 06 45065722 45068027 Amo12g3427 12 123432640 123434771 PCT
Amo12g3427 12 123432640 123434771 Amo06g1509 06 45065722 45068027 PCT