Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1509 ATGGAAAGTTCAACATCAAAAGAAGATGTTCTAAAGCCAGTGATCCTCAAAGCTAGTATTCCTTTAGCTGTTACTTTTGGTGGTTTAATCTATACATGGATCAAAGCAAAGAGATGTTTATCTAAGGCTCCTTCCTTATCAACAAATGAAGCGATTTCTAATGGCAACAATTCTCAACAAGGTGAAGAAAGTTGCCTTAGCCTTGCTTCAATGGAAGAATATGAAGGAGACAGTGCGTTTGGTGAGACATCCGTGATCCATGATTACAGTGAAAATCCATGTTTTGAGGAAGAGATTAACAGCCTAAGAAGCCAGATTGAAGGTATGAAAATGAAGGAATTGGCCTTGAGGTTGCAGTTTGATCAGTTTTGTGGCTTGAGAGAGCAAGAACTTGAGCTTGGAGAAATCAAGAATGCACTTTCGCTTGAGATCGCCCGCATCGGTTTCTTGGAAAGGGAGATTTCATCCATGGAGGCAGAGCATAAGAGGTTGGAGGATTGGAGATCGGAGAATAAGTTGCTTCAGAAGAGGTTTAAGAAGCTGCAGAGGAGATCGATGGCGCAGTATCGCATTGTGAAGGAGCAGGCCTTGATGATCAAGGCAGAGGAAGCAGAAATCTTGAGATGCCATGATGAATTGAGAATGAAGGTTAACATTATTGATGAATTAGAGGATGAAATCAAGAAACTGCAAAGGGAATTGGATCAATTGCAGGATCACAAGAATGAACTTCTTAAGAAGATTGACACACTTGAAAGATTACATGCGTCTAAGATTGAGGTAAGTAGGGAAGATTACAACCATGTTGTGGATGAATTGGACCATGTGAAGAAGGAACAAGCAGATGAAGCTAAAGAACTGATTCACTTGCGTTGGACCAATGCTTGCTTAAGGCACGAGATAACAAGGCACCATGACAACGTACATCAGCATCAGCACGGAGACAACAACATAGAACTTGAACCTGGAGGAGGAAGCGATAATCAAGTTACTCATTATGACTCCGACCATGATCAATCACATGATGATGATGGTTCATCATTTGAGCATCACAGTGTTTCTCATTTTGTTTCCTTTCGTCACGGCAATAATGGAACTCGTTCGAAAAGCGGAAAGCTGCTTAGAAGGATAAAGAGATGGGTTGAAGGCACTGAAACAAGCAAAACTTAG 1170 0.412 MESSTSKEDVLKPVILKASIPLAVTFGGLIYTWIKAKRCLSKAPSLSTNEAISNGNNSQQGEESCLSLASMEEYEGDSAFGETSVIHDYSENPCFEEEINSLRSQIEGMKMKELALRLQFDQFCGLREQELELGEIKNALSLEIARIGFLEREISSMEAEHKRLEDWRSENKLLQKRFKKLQRRSMAQYRIVKEQALMIKAEEAEILRCHDELRMKVNIIDELEDEIKKLQRELDQLQDHKNELLKKIDTLERLHASKIEVSREDYNHVVDELDHVKKEQADEAKELIHLRWTNACLRHEITRHHDNVHQHQHGDNNIELEPGGGSDNQVTHYDSDHDQSHDDDGSSFEHHSVSHFVSFRHGNNGTRSKSGKLLRRIKRWVEGTETSKT* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1509 389 Coils Coil 213 254 - -
Amo06g1509 389 Coils Coil 157 184 - -
Amo06g1509 389 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 388 IPR040265 -
Amo06g1509 389 MobiDBLite consensus disorder prediction 307 349 - -
Amo06g1509 389 MobiDBLite consensus disorder prediction 331 349 - -
Amo06g1509 389 PANTHER CHUP1-LIKE PROTEIN 1 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1509 Amo-Chr6 45065722 45068027 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1509 - - adu:107493834 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g1509 06 45065722 45068027 Amo12g3427 12 123432640 123434771 PCT
Amo12g3427 12 123432640 123434771 Amo06g1509 06 45065722 45068027 PCT