Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3401 ATGGGAATATTGCATGATGATGTAGTGATATTCAGGGAGGCAGAGAAAGAAGGAGATCCAACAGTGATAACAGTGAACTGTCCTGACAAAACTGGTCTTGGTTCTGATCTGTGTCGAATCATACTCTTCTTTGGTCTTAGCATTGTAAGAGGAGATGTGTCAACAGATGGGAAATGGTGTTACATAGTATTGTGGGTGGTTGGGAAAGAGAATACAAGATGGAGTTTGTTGAAGAAGAGGCTAATTGGGGCATGCCCTTCTTGTTCCTCAGCTTCTGGAATCTCTTATTACTCTTCTGATTTCCATCCACCTAAGCCTCCTCATGTCTTTCTTCTCAAGTTTAATTGCTATGATCGCAAAGGCCTTTTACATGATGTTACAGAGGCTCTATGTGAACTAGAGCTTGTCATAAAGAAAGTGAAGGTATCTACTACACCTGATGGCAAAGTCATGGATCTCTTTTTCATCACAGACACAAGAGAACTTATGCATACTGAAAAGAGAAAGGAAGATACCAAAGAATATTTAAGAGGAGCATTGAAGGATGCCATCATTGATATAGACATTGAATTGGTAGGGCCGGCGGCGGATATTTGCTCGCCGGCATCATCGTTTCTTCTGGGCGGCAATCACCGATGA 639 0.4194 MGILHDDVVIFREAEKEGDPTVITVNCPDKTGLGSDLCRIILFFGLSIVRGDVSTDGKWCYIVLWVVGKENTRWSLLKKRLIGACPSCSSASGISYYSSDFHPPKPPHVFLLKFNCYDRKGLLHDVTEALCELELVIKKVKVSTTPDGKVMDLFFITDTRELMHTEKRKEDTKEYLRGALKDAIIDIDIELVGPAADICSPASSFLLGGNHR* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3401 212 SUPERFAMILY ACT-like 108 161 IPR045865 -
Amo12g3401 212 SUPERFAMILY ACT-like 18 81 IPR045865 -
Amo12g3401 212 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Amo12g3401 212 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 206 - -
Amo12g3401 212 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 206 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3401 Amo-Chr12 123182187 123184856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3401 - - gmx:100818216 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g3401 12 123182187 123184856 Amo12g3401 12 123182187 123184856 ECH
Amo06g1375 06 34980354 34983415 Amo12g3401 12 123182187 123184856 PCT
Amo12g3401 12 123182187 123184856 Amo06g1375 06 34980354 34983415 PCT