Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g1375 ATGGGAATATTACAGGACGATGTGGTGATCATAAGGCAGCCAGACAAAGAAGGTGGCCCAACCGTCATAACCGTGAATTGCCCTGACAAGACTGGTCTTGGTTGTGATCTGTGCCGCATCATTCTCTTCTTTGGTCTTAGCATTGTGCGAGGAGATGTTTCAACGGATGGGAAATGGTGCTACATAGTGTTGTGGGTGGTGGGGAGAGAGAAGACAAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGGGGCATGCCCTTCTTGCTCCTCTGCCTCTGGAATCTCATATTACCGCTCTGAGTTGCAGCAACCACCGAAGCCCCCTGATGTCTTCCTCTTGAAGTTTTGTTGCCATGATCGTAGAGGCCTTTTGCATGATGTTACAGAGGTTCTTTGTGAGCTAGAGTTAACCATAAAGAAGGTGAAGGTATCTACTACACCTGACGGCAAAGTGATGGATCTGTTTTTCATCACCGACACAAGGGAACTTCTGCATACACCAAAAAGAAGGGACGACACGATTCAACAGTTGACAGATACTTTGAAGGATGCGTTAATTTCGATTGAAATTGAATTGGTTGGTCCAGAAATTGCTGCTTGCTCTCAAGCATCCTCATTTCTTCCAACTGCCATCACAGAAGATATATTCAATTTGGAATTGCCCGATCCTGGTCGAGGTGGGGTTTTCACATCAGATTCTATCTCCATTGTTATGGACAATTTGCTGAGTCCTTCCCACACACTTGTCCAAATTATGTGCCAAGATCACAAAGGTCTTCTTTATGACATCATGAGAACTCTGAAGGACTATAATATTCAGATTTCTTATGGACGCTTCATGACAAAACCTAGAGGAAAATGTGAGCTTGACTTGTTCATCATGCAAGCCGATGGCAAAAAGATAGTCGACTCGAGCAAGCAGAAGTCTTTGTCTGCTCGCCTTAGGACCGAGCTACTCCGTCCTCTCAAAGTCACTGTTGTGAGCAGGGGCCCTGATACGGAGCTACTGGTCGCAAACCCCGTGGAGTTGTCCGACAAGGGACGGCCTCTTGTGTTTCATGATATTACTCTTGCACTTAAAATGCTAGGCATATGCATCTTTTCGGCTGAAATCGGAAGACATGCAATTGGAGACCGGGAATGGGAAGTTTATAGAATCTTGCTGGATGAAGGGGAGGGATCGCCACTTCCAAGGAACAAGATTGAGAAAGGTGTATGGAATATGTTGATGGGCTGGGAGTGA 1242 0.4573 MGILQDDVVIIRQPDKEGGPTVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWCYIVLWVVGREKTRWSLLKKRLIGACPSCSSASGISYYRSELQQPPKPPDVFLLKFCCHDRRGLLHDVTEVLCELELTIKKVKVSTTPDGKVMDLFFITDTRELLHTPKRRDDTIQQLTDTLKDALISIEIELVGPEIAACSQASSFLPTAITEDIFNLELPDPGRGGVFTSDSISIVMDNLLSPSHTLVQIMCQDHKGLLYDIMRTLKDYNIQISYGRFMTKPRGKCELDLFIMQADGKKIVDSSKQKSLSARLRTELLRPLKVTVVSRGPDTELLVANPVELSDKGRPLVFHDITLALKMLGICIFSAEIGRHAIGDREWEVYRILLDEGEGSPLPRNKIEKGVWNMLMGWE* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g1375 413 SUPERFAMILY ACT-like 108 179 IPR045865 -
Amo06g1375 413 SUPERFAMILY ACT-like 19 81 IPR045865 -
Amo06g1375 413 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 413 - -
Amo06g1375 413 SUPERFAMILY ACT-like 244 299 IPR045865 -
Amo06g1375 413 ProSiteProfiles ACT domain profile. 112 195 IPR002912 -
Amo06g1375 413 Gene3D - 109 193 - -
Amo06g1375 413 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 413 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g1375 Amo-Chr6 34980354 34983415 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g1375 - - gmx:100797226 712.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g1375 06 34980354 34983415 Amo12g3401 12 123182187 123184856 PCT
Amo12g3401 12 123182187 123184856 Amo06g1375 06 34980354 34983415 PCT