Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo12g3174 ATGTCGGATTCACCCAGCAAGATCCCTCCTACAACCGAAGTGGACCTTGGTTTTGAGAAGGTTCCTGAGAAGATTGAAGAAGATGGAAAAGTTGCAGGTCCCATGCTCCATTGTGGTAATTGTGATACAGAAGTAGTTCACAAGCTGGCTGAAATGTTCCTTCCAGGATTGGCTTGTGCCTGCGTCGATAACACGACCGGATATCCCTTCTCCACACCTGGTTCAGTGGCAGGTAATTTCAGAAAGGAAATGATAGATTATCTCACACAAAGAAGTGAATCATTTGTTGCTGAGTCTGTTATCTTAGAAGGTGATCCACAAGGTCTCTGGATGGCTGCTAAGTGA 345 0.4522 MSDSPSKIPPTTEVDLGFEKVPEKIEEDGKVAGPMLHCGNCDTEVVHKLAEMFLPGLACACVDNTTGYPFSTPGSVAGNFRKEMIDYLTQRSESFVAESVILEGDPQGLWMAAK* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo12g3174 114 PANTHER TNF RECEPTOR ASSOCIATED FACTOR 9 107 IPR043211 -
Amo12g3174 114 PANTHER NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE 9 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo12g3174 Amo-Chr12 120480212 120481786 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo12g3174 - - pvu:PHAVU_001G200100g 146.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0402 06 5480739 5483921 Amo12g3174 12 120480212 120481786 PCT
Amo12g3174 12 120480212 120481786 Amo06g0402 06 5480739 5483921 PCT